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Showing : network • reset
14
Votes
13
Replies
3.8k
Views
8 follow
A Cytoscape Plugin For Grouping Nodes By 'Compartment' ?
cytoscape interaction network
9.6 years ago
Lyco ♦ 2.3k
0
Votes
5
Replies
164
Views
Community detection in R thanks to the igraph package
r network community igraph
19 months ago
vincentpailler • 50 • updated 19 months ago
Jean-Karim Heriche 19k
0
Votes
2
Replies
106
Views
Network modeling of data produced by mixOmics (R) in Cytoscape
cytoscape mixOmics network multiomics
20 months ago
IrK • 30
0
Votes
0
Replies
129
Views
How to plot the correlations between OTUs and genes?
igraph otu gene network
20 months ago
vincentpailler • 50
0
Votes
0
Replies
98
Views
CINNA centrality score and retrieving node names
WGCNA network CINNA package centrality score
20 months ago
hennet.lauriane • 40
3
Votes
1
Reply
134
Views
Construct a gene co-expression network with WGCNA
wgcna R correlation network
20 months ago
Jenny Han • 10
92
Votes
59
Replies
12k
Views
10 follow
Tutorial: Network plot from expression data in R using igraph
R Tutorial microarray RNA-Seq network
3.2 years ago
Kevin Blighe 43k • updated 20 months ago
Gabriel • 20
0
Votes
10
Replies
228
Views
Plot the correlations between OTUs and genes
igraph correlation network
20 months ago
vincentpailler • 50
0
Votes
2
Replies
193
Views
How to rank genes on the basis of degree in cytohubba in cytoscape
cytoscape network centrality gene
20 months ago
xxxxxxxx • 0
5
Votes
3
Replies
3.0k
Views
How To Visualize Network Comparatively Via Cytoscape Or Other Tools
network cytoscape
8.2 years ago
maddy • 20 • updated 21 months ago
Biostar 20
118
Votes
31
Replies
95k
Views
28 follow
Is There A Free Alternative To Ingenuity Pathway Analysis?
network pathway
9.9 years ago
Gon • 470 • updated 21 months ago
malina • 0
3
Votes
3
Replies
5.1k
Views
From Distance Matrix To Network
distance network cytoscape
7.4 years ago
SamGG • 20 • updated 22 months ago
Kevin Blighe 43k
0
Votes
4
Replies
201
Views
Cytoscape - disproportionately big files
cytoscape network
23 months ago
boczniak767 • 640
6
Votes
3
Replies
383
Views
How to study gene expression network?
gene expression network bioinformation
23 months ago
afli • 180 • updated 23 months ago
mayagreen993 • 0
4
Votes
4
Replies
349
Views
WGCNA network Analysis
WGCNA Network GEO TCGA R
23 months ago
biotechuos4 • 0 • updated 23 months ago
zx8754 7.5k
0
Votes
0
Replies
145
Views
Annotation of unknown gene sequences in order to annotate PPI's
MRSA sequence network PPI annotation
23 months ago
laurahjort • 0
2
Votes
2
Replies
250
Views
What does cluster number in ClusterMaker represent?
cytoscape clustering clustermaker network
24 months ago
Arindam Ghosh • 160 • updated 24 months ago
scooter • 80
0
Votes
1
Reply
1.2k
Views
How to import a list of gene and visualize gene-gene interaction in Cytoscape zebrafish session
gene Cytoscape network
4.1 years ago
Farbod ♦ 3.3k • updated 24 months ago
xanderpico • 170
9
Votes
15
Replies
367
Views
Pick soft threshold for co-expression analysis and filtering step
RNA-Seq wgcna coexpression r network
2.0 years ago
Biologist • 150 • updated 2.0 years ago
Kevin Blighe 43k
1
Vote
1
Reply
312
Views
Gene Set (enrichr) and Gene Interaction Data for CEMiTool
coexpression network functional enrichment
2.1 years ago
BELA • 0 • updated 2.0 years ago
pedrostrusso • 20
0
Votes
5
Replies
4.2k
Views
Wgcna: Exporting Network To Cytoscape For Blockwise Module Construction
r cytoscape network
7.3 years ago
pixie@bioinfo ♦ 1.4k • updated 2.1 years ago
Biostar 20
2
Votes
3
Replies
333
Views
How to construct GCN?
RNA-Seq network gene coexpression network
2.1 years ago
Arindam Ghosh • 160 • updated 2.1 years ago
Kevin Blighe 43k
1
Vote
5
Replies
558
Views
String network analysis
gene string network
2.1 years ago
mayada_mazher1991 • 0 • updated 2.1 years ago
guangyan.zh0 • 0
2
Votes
1
Reply
287
Views
how to add gene name in cluego?
cytoscape cluego network genes
2.1 years ago
BioNoobie • 10 • updated 2.1 years ago
scooter • 80
0
Votes
2
Replies
321
Views
Importing networks from Cytoscape public database is very very slowly!
Cytoscape network web database
2.1 years ago
BioLite • 20 • updated 2.1 years ago
scooter • 80
0
Votes
6
Replies
343
Views
Compare the degree distribution of a real networks and multiple random networks
kolmogorov-smirnov network
2.1 years ago
The Last Word • 170
7
Votes
2
Replies
2.3k
Views
Comparison Of Biological Graphs/Networks
graph clustering network
7.3 years ago
tigeradab • 50 • updated 2.1 years ago
kuntal.bhusan • 20
0
Votes
0
Replies
239
Views
how can I extract group or modules from a huge number of intractions between gene-TF or gene-miRNA?
Network Interaction
2.2 years ago
Expert • 30
0
Votes
0
Replies
219
Views
CLRS-type algorithms on sna/network
graph network ggnetwork sna r
2.2 years ago
mk • 90
0
Votes
0
Replies
276
Views
Displaying a controversial phylogenetic tree as a network to explicitate noise-generating branches
phylogenesis tree network convert genome
2.5 years ago
Macspider ♦ 2.8k • updated 2.2 years ago
Biostar 20
0
Votes
1
Reply
383
Views
SplitsTree command line mode
SplitsTree phylogeny network command line pipeline
2.2 years ago
Macspider ♦ 2.8k
0
Votes
0
Replies
219
Views
Comparing between different groups of clusters after network clustering
network
2.2 years ago
The Last Word • 170
0
Votes
0
Replies
217
Views
Less number of motifs found in the real network when compared to the random network
network motif
2.3 years ago
The Last Word • 170
0
Votes
2
Replies
405
Views
Gene regulatory networks from expression data
RNA-Seq network
2.4 years ago
pixie@bioinfo ♦ 1.4k • updated 2.3 years ago
Biostar 20
1
Vote
5
Replies
359
Views
Comparison of the networks of two species
network
2.3 years ago
The Last Word • 170 • updated 2.3 years ago
Kevin Blighe 43k
6
Votes
1
Reply
2.0k
Views
Synthetic Lethality In Networks
network bioconductor
8.8 years ago
Tonig • 430 • updated 2.4 years ago
Biostar 20
0
Votes
2
Replies
274
Views
Small pathways but big network files
cytoscape network
2.4 years ago
boczniak767 • 640 • updated 2.4 years ago
scooter • 80
50
Votes
7
Replies
4.3k
Views
Library / Module For Network Analysis
network
10.5 years ago
Khader Shameer 18k • updated 2.4 years ago
RamRS 21k
0
Votes
0
Replies
262
Views
How to generate a Disease specific network
PPI network microarray expression
2.4 years ago
Honey • 20
3
Votes
9
Replies
1.4k
Views
WGCNA pearson or bicor? Also, should I adjust module correlation Pvalues by Bonferroni?
WGCNA Network pearson bicor
2.4 years ago
jagoor93 • 0 • updated 2.4 years ago
Kevin Blighe 43k
0
Votes
6
Replies
356
Views
conversion of hippie network to .net format
network conversion
2.5 years ago
shivangi.agarwal800 • 60 • updated 2.5 years ago
Biostar 20
0
Votes
5
Replies
459
Views
co expression network
R PROGRAMMING NETWORK BIOCONDUCTOR
2.6 years ago
gbahramali • 20 • updated 2.6 years ago
pbpanigrahi • 180
2
Votes
7
Replies
669
Views
What if a network is not scale-free?
network cytoscape RNA-Seq
2.6 years ago
Arindam Ghosh • 160
3
Votes
2
Replies
353
Views
Normalised counts of control samples in gene expression matrix
RNA-Seq expression matrix network R matrix
2.6 years ago
Pranavathiyani G • 230 • updated 2.6 years ago
Devon Ryan 90k
4
Votes
4
Replies
766
Views
WGCNA network with condition and normal samples
WGCNA network RNA-Seq
2.6 years ago
saptarathideb • 0 • updated 2.6 years ago
Jake Warner • 730
1
Vote
4
Replies
635
Views
How to plot two networks with overlapping nodes?
network
2.6 years ago
zhang.jianhai • 0
4
Votes
3
Replies
385
Views
Create a network file to specie without PPI information
cytoscape ppi network
2.7 years ago
aboutmb • 0 • updated 2.7 years ago
Leite • 400
0
Votes
1
Reply
361
Views
Cytoscape color code according to own annotations
cytoscape enrichment string network
2.7 years ago
frida.danielsson • 40 • updated 2.7 years ago
Jean-Karim Heriche 19k
0
Votes
0
Replies
238
Views
proteins.actions file of string
string network
2.7 years ago
noeD • 70
0
Votes
1
Reply
412
Views
Analyze network clusters with not much biological information
network
2.8 years ago
The Last Word • 170 • updated 2.7 years ago
Biostar 20
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