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Showing : isoform • reset
1
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2
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73
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STAR+HTSeq gene counts vs STAR+RSEM genes and how to combine isoforms to get the gene counts?
4 months ago jennygenome • 0 • updated 4 months ago swbarnes2 5.7k
2
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3
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1.9k
Views
Fusion Isoform Quantification
5.5 years ago Nicolas Rosewick 7.7k • updated 5 months ago Biostar 20
1
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6
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276
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Some problems with DEXSEQ analyse
7 months ago darbinator • 180
2
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3
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322
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How to distinguish if a gene is a paralogue or an isoform?
8 months ago DNAngel • 30 • updated 7 months ago kashiff007 • 50
0
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0
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356
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Identifying 5p and 3p in miRNA isoform expression data from TCGA for feature selection
11 months ago jiaqiwu • 0
3
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17
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511
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Relative transcript expression
16 months ago Govardhan Anande • 130 • updated 16 months ago WouterDeCoster 39k
0
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2
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1.6k
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Calculating Distance To Polya Site For Each Exon For Given Gene.Name
7.0 years ago Puriney • 330 • updated 23 months ago Biostar 20
1
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3
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728
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Finding isoform in RNA-seq data
23 months ago mari.felix5723 • 10 • updated 23 months ago Devon Ryan 90k
1
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3
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1.1k
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recognize known isoform from transcript mapping
4.6 years ago ghbore • 0 • updated 2.1 years ago Biostar 20
1
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0
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702
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How to access up-to-date exon data from GTEx project
2.2 years ago vlrieg • 10
2
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2
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599
Views
two different UCSC isoforms for the same transcript
2.3 years ago donegal77 • 0
6
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7
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3.4k
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Identifying Genes That Express Different Isoforms In Cancer Vs Normal Rna-Seq Data
7.2 years ago Sahel • 250 • updated 2.3 years ago kristoffer.vittingseerup ♦ 1.8k
5
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8
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1.3k
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6 follow
Differential isoform expression analyses
3.0 years ago rmf • 630 • updated 2.3 years ago kristoffer.vittingseerup ♦ 1.8k
1
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3
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927
Views
What is the best tool for isoform function prediction?
2.6 years ago Fill • 70 • updated 2.4 years ago Biostar 20
13
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13
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6.1k
Views
6 follow
How to extract the longest isoform from multi fasta file
5.2 years ago jon.brate • 220 • updated 2.5 years ago Biostar 20
2
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1
Reply
1.0k
Views
Single-cell RNA-seq normalization with ERCC for isoform analysis
2.9 years ago garyhokawai • 30 • updated 2.9 years ago Mike ♦ 1.3k
0
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2
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2.0k
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Error when running MISO
3.7 years ago onspotproductions • 130 • updated 3.2 years ago joe • 0
0
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2
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823
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New isoform discovery with paired end reads across different exons
3.3 years ago thomasterTW • 20 • updated 3.3 years ago EagleEye 6.4k
0
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0
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685
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MISO :: Filtered out "n" read pairs that were on same strand
3.4 years ago Govardhan Anande • 130
7
Votes
1
Reply
3.3k
Views
Hisat2 on multiple paired-end input
3.4 years ago dovah • 30 • updated 3.4 years ago Devon Ryan 90k
1
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6
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2.4k
Views
Identification of major isoform per gene from RNA-Seq
3.5 years ago Leszek 4.0k
4
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6
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1.2k
Views
TERT isoform discrepancies UCSC vs Ensembl
3.6 years ago floris.barthel • 40 • updated 3.6 years ago Emily_Ensembl 18k
2
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2
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1.1k
Views
PE or SE reads for alternative splicing / isoform quantification?
3.6 years ago nevev • 90 • updated 3.6 years ago Brian Bushnell 16k
2
Votes
1
Reply
862
Views
ensemble illumina tissues aligned rnaSeq
3.9 years ago fk566938 • 10 • updated 3.9 years ago mkulecka • 300
3
Votes
6
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2.9k
Views
Finding isoform expression in RNA-Seq
4.7 years ago Whoknows • 740 • updated 4.0 years ago andrew.j.skelton73 5.7k
9
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4
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1.6k
Views
differential expression at transcript level with paired samples
4.2 years ago mjg • 20 • updated 4.2 years ago lakigigar • 220
2
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4
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2.2k
Views
In TCGA RNA-seq exon specific data, why not all the exons of a particular isoform have similar read (RPKM)?
4.2 years ago ruhulmb • 0 • updated 4.2 years ago Devon Ryan 90k
4
Votes
2
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1.9k
Views
Are Novel Junctions Only Give Novel Transcripts?
7.6 years ago Ngsnewbie • 360 • updated 4.3 years ago Biostar 20
2
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2
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2.1k
Views
How to get the coding sequence of each isoform of a gene?
4.4 years ago bounlu • 170 • updated 4.4 years ago Emily_Ensembl 18k
3
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4
Replies
1.4k
Views
Any advice on how to do isoform quantification?
4.4 years ago cyril-cros • 890
0
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1
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1.4k
Views
Aligning UniProt Canonical Sequences With Their Isoform Sequences
4.5 years ago pwg46 • 370 • updated 4.5 years ago Elisabeth Gasteiger ♦ 1.6k
1
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3
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1.4k
Views
AUGUSTUS principal isoform
4.8 years ago jomaco • 190
64
Votes
8
Replies
12k
Views
7 follow
How Are Rna-Seq Transcripts Assigned?
7.7 years ago Dave Bridges ♦ 1.3k • updated 5.2 years ago Malachi Griffith 17k
10
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2
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3.0k
Views
Is It Normal For Cufflinks Produce Different Results In Multiple Runs
8.6 years ago Superligang • 70 • updated 5.4 years ago Biostar 20
0
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0
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1.2k
Views
Question about assess Multiple Sequence Alignment
5.4 years ago Chong Tang • 80 • updated 5.4 years ago Devon Ryan 90k
0
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0
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2.2k
Views
Cufflinks & Cuffdiff Novel Isoform Detection
5.6 years ago andrew.j.skelton73 5.7k
0
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1
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2.3k
Views
Differential Isoform Expression In Cuffdiff: How Does It Work?
5.7 years ago gwilymh1000 • 0
1
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4
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3.8k
Views
Major/Minor Isoform And Tissue-Specific Expression
6.1 years ago Pierre • 120
12
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9
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3.0k
Views
Alignment Free Expression Quantification Using Sailfish: Any Experience?
6.2 years ago johnstantongeddes • 410 • updated 6.1 years ago Madelaine Gogol 5.1k
1
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0
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1.3k
Views
Single Reference Sequence For Each (Ensembl) Gene?
6.2 years ago mjchen.sub • 10
51 results • Page 1 of 2
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New test post with the AJAX system
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Markdown
A: Which Are The Best Programming Languages For A Bioinformatician?
A: Which Are The Best Programming Languages For A Bioinformatician?
Answer: Which Are The Best Programming Languages For A Bioinformatician?
how do I run this recipe
C: How to apply vcftools --diff to identify vcf-specific variants/records
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Recent Replies
Comment: " testing dfg " by RamRS 21k
Testing <u>underline</u> functionality.
Answer: Which Are The Best Programming Languages For A Bioinformatician? by Anna • 0
I could recommend you this research - https://www.romexsoft.com/blog/aws-hipaa-compliance-best-practices-checklist/
Comment: " testing dfg " by RamRS 21k
Testing comment with parentheses in URL: (this URL: https://www.ncbi.nlm.nih.gov/search/all/?term=BRCA1%20AND%20(Human%20OR%20Mouse))
Comment: get gene biotype for hg38 refseq by Natay Aberra 0
test the bumping
Comment: get gene biotype for hg38 refseq by genomax 68k
http://test.biostars.org/accounts/profile/2/ http://test.biostars.org/p/34/
Comment: New test post with the AJAX system by Natay Aberra 0
Yeah we will probably end up doing that.
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/accounts/profile/18713/ http://test.biostars.org/p/p371267/#p371295 test the bumping
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/p/p371285/ http://test.biostars.org/accounts/profile/user-2/
Comment: New test post with the AJAX system by genomax 68k
Checking to see if this comment bumps the thread to top.
Comment: Markdown by genomax 68k
http://test.biostars.org/p/p371285/
Comment: Markdown by genomax 68k
@nba5048: Why is the original post showing up in separate sections? No way to use old style reference to users: http://test.biostars.org/a…
Comment: Markdown by Natay Aberra 0
Check your biostar messages, You did get a notification.
Comment: Markdown by ATpoint 17k
Test image: ![enter image description here][1] [1]: http://oi66.tinypic.com/33kdnjt.jpg
Comment: Markdown by ATpoint 17k
Nope, no notification.
Comment: Markdown by zx8754 7.5k
testing atting to users @ATpoint25721 @RamRS do we get pinged?
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