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23 results • Page
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Showing :
haplotypes
•
reset
1
Vote
1
Reply
140
Views
selscan not outputting ihs
selscan
haplotypes
vcf
21 months ago
sonia.olaechea
• 90
• updated 20 months ago
zhuantouliuzi
• 0
0
Votes
1
Reply
163
Views
Imputating individual haplotype phase w/o Plink
Plink
BEAGLE
haplotypes
imputation
genetics
22 months ago
los
• 0
0
Votes
1
Reply
134
Views
Haploview cannot connect to HapMap Database
haploview
hapmap
genome
haplotypes
GWAS
22 months ago
novice_bioinformatician
• 0
0
Votes
0
Replies
134
Views
Singe cell identification library with Ensembl_ID:s
Ensembl
library
haplotypes
Gene_ID
annotation
23 months ago
chilifan
• 70
0
Votes
5
Replies
357
Views
Haplotype block in PLINK using r2 values
plink
SNP
LD
haplotypes
2.1 years ago
GabrielMontenegro
• 520
2
Votes
4
Replies
327
Views
Does Bowtie2 index use haplotypes and patches? and is the reference genome of Bowtie2 from UCSC or ensembl?
ChIP-Seq
haplotypes
scaffolds
Bowtie2
ensembl
2.5 years ago
salamandra
• 200
• updated 2.5 years ago
Devon Ryan
90k
0
Votes
1
Reply
752
Views
Identifying mutations between haplotypes using haploNet (pegas) in R
R
pegas
haplotypes
phylogenetics
2.8 years ago
GabrielMontenegro
• 520
• updated 2.6 years ago
Jie Ping
• 20
4
Votes
10
Replies
1.6k
Views
Getting Haplotypes from a VCF file
Freebayes
VCF
haplotypes
2.9 years ago
gkuffel22
• 70
• updated 2.8 years ago
Biostar
20
0
Votes
0
Replies
500
Views
Do I need to reconstruct haplotypes from SNP data to calculate nucleotide diversity?
haplotypes
SNPs
nucleotide diversity
2.9 years ago
suzyhocking
• 0
2
Votes
3
Replies
986
Views
Is it possible to use haplotypes instead of SNPs for association testing with phenotypes?
SNP
haplotypes
gwas
3.5 years ago
William
♦ 4.4k
• updated 3.5 years ago
GabrielMontenegro
• 520
2
Votes
0
Replies
865
Views
What's the difference between Phased Haplotypes and Phased Genotypes?
haploview
genotypes
phasing
haplotypes
plink
3.8 years ago
veronicaschroeder78
• 110
0
Votes
0
Replies
962
Views
Does HaploView perform phasing?
HaploView
Phasing
PHASE
fastPHASE
Haplotypes
3.9 years ago
veronicaschroeder78
• 110
0
Votes
0
Replies
1.0k
Views
From PHASE to HaploView
Phase
HaploView
Phasing
Haplotypes
Visualization
3.9 years ago
veronicaschroeder78
• 110
0
Votes
2
Replies
3.2k
Views
Viewing Plink files in Haploview
haplotypes
plink
haploview
6.7 years ago
angel0071987
• 0
• updated 4.0 years ago
melaniesmontes
• 0
7
Votes
1
Reply
1.7k
Views
Phased - Unphased genotypes
SNP
gene
impute
phased genotypes
haplotypes
4.1 years ago
mzezza
• 10
• updated 4.1 years ago
Brian Bushnell
16k
1
Vote
1
Reply
1.0k
Views
Haplotypes; phasing, positve seletion and estimating age
haplotypes
resequencing
4.3 years ago
Floris Brenk
• 890
• updated 4.3 years ago
Giovanni M Dall'Olio
26k
0
Votes
2
Replies
1.1k
Views
Merging several DISCOVAR "variant" files
vcf
variant
haplotypes
phasing
5.9 years ago
Adrian Pelin
♦ 2.3k
• updated 5.8 years ago
Biostar
20
1
Vote
0
Replies
2.6k
Views
SHAPEIT output file confusion
shapeit
haplotypes
SNP
5.9 years ago
j.a.yearsley
• 10
0
Votes
1
Reply
1.3k
Views
To what database do Haplotype Ids in pharmgkb.org belong to?
haplotypes
pharmgkb
6.7 years ago
igor.fobia
• 0
• updated 5.9 years ago
markwoon
• 0
0
Votes
1
Reply
1.4k
Views
Best way to phase regions with known recombinations?
Phasing
Recombination
Haplotypes
6.2 years ago
adFundumify
• 0
• updated 6.2 years ago
Adam
• 990
0
Votes
0
Replies
1.6k
Views
How to Create Haplotype trees from Y-Chromosome SNP data
SNP
sequencing
Haplotypes
6.4 years ago
mattbawn
• 40
9
Votes
2
Replies
1.8k
Views
Making use of phased haplotypes in rare variant burden testing
GWAS
NGS
Burden
Phasing
Haplotypes
6.4 years ago
vlaufer
• 260
• updated 6.4 years ago
brentp
23k
1
Vote
0
Replies
1.5k
Views
Calculating association with outcome variable and Phased Haplotypes
Phasing
Haplotypes
6.5 years ago
viavialin
• 70
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