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162 results • Page
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Showing :
gene ontology
•
reset
1
Vote
1
Reply
351
Views
View gene list in GAGE enriched terms
gage
gsea
gene ontology
2.7 years ago
mbk0asis
• 420
• updated 20 months ago
giderk
• 0
0
Votes
1
Reply
119
Views
How to get wikipathways without disease and cancer ontologies?
wikipathways
RNA-Seq
GSEA
gene ontology
20 months ago
Gabriel
• 20
2
Votes
8
Replies
278
Views
Visualisation of GO Terms
GO
Gene Ontology
TopGO
21 months ago
miles.thorburn
• 80
0
Votes
2
Replies
603
Views
Classifying DEGs based on the tissue where it is expressed
gene ontology
deseq2
RNA-Seq
3.3 years ago
Sreeraj Thamban
• 140
• updated 21 months ago
Biostar
20
7
Votes
11
Replies
226
Views
Split comma seperated list of GO terms into multiple rows and maintain gene identifier in each
Gene ontology
data manipulation
21 months ago
Biogeek
• 350
• updated 21 months ago
st.ph.n
♦ 2.5k
3
Votes
2
Replies
192
Views
Where and how can I find uncharacterized genes in the human genome?
genome
gene ontology
annotation
21 months ago
nathanielbd
• 0
• updated 21 months ago
Emily_Ensembl
18k
6
Votes
13
Replies
1.3k
Views
Hypergeometric GO analysis? and network diagram of generated GO terms
gene ontology
network diagram
visualization
4.1 years ago
mforde84
♦ 1.2k
• updated 22 months ago
Biostar
20
1
Vote
1
Reply
144
Views
What kind of BLAST to use in Gene Ontology?
gene ontology
protein
blast
alignment
22 months ago
l.souza
• 70
• updated 22 months ago
Bill Pearson
• 860
1
Vote
0
Replies
175
Views
List Genes from HyperGTest GO terms
R
Gene Ontology
HyperGTest
gostats
22 months ago
lvande
• 50
3
Votes
3
Replies
391
Views
GOplot and making circle_dat out of microarray and DAVID data
R
microarray
GOplot
gene ontology
plot
23 months ago
farzaneafzali
• 50
• updated 23 months ago
MasMarius
• 10
0
Votes
0
Replies
129
Views
How to get GO terms from EcoCyc gene identifiers?
genome
e coli
ecocyc
gene ontology
23 months ago
O.rka
• 110
0
Votes
2
Replies
444
Views
Tool or package to make a plot of multiple species GO comparison
Gene ontology
package
GO
VISUALIZATION
TOOL
2.3 years ago
rice.researcher
• 130
• updated 23 months ago
matz
• 0
1
Vote
3
Replies
288
Views
gene ontology analysis based on transcript biotype
gene ontology
transcript
biotype
2.0 years ago
lkianmehr
• 30
• updated 2.0 years ago
EagleEye
6.4k
10
Votes
5
Replies
457
Views
What's your preferred pathway enrichment analysis tool after DEG analysis and why?
gene ontology
RNA-Seq
2.0 years ago
unawaz
• 40
• updated 2.0 years ago
Jean-Karim Heriche
19k
1
Vote
1
Reply
252
Views
some questions to do GO enrichment analysis
Gene ontology
RNA-seq
Mouse
2.0 years ago
lkianmehr
• 30
• updated 2.0 years ago
EagleEye
6.4k
2
Votes
2
Replies
575
Views
Is there a way to get the name or IDs of genes with the goseq table?
RNA-Seq
gene ontology
goseq
2.1 years ago
unawaz
• 40
• updated 2.1 years ago
magicpants
• 60
0
Votes
3
Replies
223
Views
Refseq accessions - getting gene function and GO terms for each one
refseq
gene function
gene ontology
2.1 years ago
Biogeek
• 350
1
Vote
1
Reply
354
Views
Venn diagram generation criteria from RNAseq data
RNA-Seq
venn diagram
criteria
gene ontology
2.1 years ago
Bolesaem
• 0
• updated 2.1 years ago
shawn.w.foley
• 670
2
Votes
5
Replies
291
Views
GO network analysis
gene ontology
2.2 years ago
shubhra.bhattacharya
• 120
• updated 2.2 years ago
paolo002
• 140
2
Votes
3
Replies
560
Views
TOPGO- how to do GO enrichment using a custom go database?
gene ontology
go enrichment
topgo
RNA-Seq
R
2.2 years ago
ahmad.iut
• 70
• updated 2.2 years ago
ahmad mousavi
• 430
0
Votes
1
Reply
234
Views
Panther pathway gene list counts
panther
pathway analysis
gene ontology
GO
2.2 years ago
rbronste
• 240
• updated 2.2 years ago
c.chakraborty
• 130
49
Votes
47
Replies
5.6k
Views
8 follow
Tutorial:
Clustering of DAVID gene enrichment results from gene expression studies
david
clustering
gene ontology
enrichment
Tutorial
2.9 years ago
Kevin Blighe
43k
• updated 2.2 years ago
skylinesky
• 0
0
Votes
0
Replies
260
Views
Calculate GO semantic similarity across proteins of different species
gene ontology
semantic similarity
2.2 years ago
engr.imrannaqvi
• 0
1
Vote
9
Replies
400
Views
How to perform GO analysis for control vs treatment?
RNA-Seq
R
DESeq2
gene ontology
2.2 years ago
t-jim
• 30
5
Votes
3
Replies
1.3k
Views
Retrieving GO terms from ensembl bacteria
gene ontology
GO terms
API
REST
Ensembl
4.0 years ago
Diego
• 50
• updated 2.3 years ago
Biostar
20
2
Votes
1
Reply
354
Views
what are the exact meaning of biological process, cellular components, and molecular functions sub-classed
Gene ontology
2.3 years ago
Expert
• 30
• updated 2.3 years ago
Michael Dondrup
46k
1
Vote
5
Replies
583
Views
is gene2go incomplete?
gene2go
entrez
gene ontology
sql
amigo
2.4 years ago
sinifdosyalari12h
• 20
• updated 2.3 years ago
Biostar
20
1
Vote
0
Replies
366
Views
News:
Gene Ontology Official Workshop - Montreal, October 16, 2018
genomics
bioinformatics
ontology
go
gene ontology
News
2.3 years ago
laurent.albou
• 0
0
Votes
0
Replies
1.6k
Views
WEGO format and GO plotting
annotation
Gene ontology
WEGO
4.9 years ago
loly.pearl86
• 20
• updated 2.3 years ago
RamRS
21k
2
Votes
4
Replies
333
Views
Getting a distinct set of Gene Ontology terms
GO
Gene Ontology
2.3 years ago
Seigfried
• 70
1
Vote
14
Replies
454
Views
Can't Make Sense Of Gene Symbols
gene symbol
gene ontology
entrez
myGene
python
2.4 years ago
sinifdosyalari12h
• 20
2
Votes
2
Replies
493
Views
What is the difference between this Biomart Code, Org.Hs.Db code and SQL code?
R
biomart
sql
gene ontology
entrez
2.4 years ago
sinifdosyalari12h
• 20
• updated 2.4 years ago
Jean-Karim Heriche
19k
4
Votes
6
Replies
879
Views
How to get Go Terms IDs from given a file that contains gene Ensembl IDs with a python script
gene
gene ontology
Ensemble IDs
Go Terms
2.4 years ago
jopealfe
• 10
• updated 2.4 years ago
jared.andrews07
♦ 2.4k
2
Votes
2
Replies
340
Views
Semicolon vs vertical line separating GO annotations in .go file
go
formatting
gene ontology
2.4 years ago
CephBirk
• 0
• updated 2.4 years ago
genomax
68k
0
Votes
1
Reply
263
Views
Put different GO samples into same GO level
go
gene ontology
level
2.5 years ago
aboutmb
• 0
• updated 2.4 years ago
Kevin Blighe
43k
0
Votes
2
Replies
314
Views
Direct vs Indirect annotation
Gene Ontology
2.4 years ago
nkhan.mscs15seecs
• 40
0
Votes
1
Reply
278
Views
GOterms Cellular component Homo Sapiens
gene ontology
GO
GOterms
gene
download
2.5 years ago
cristygonzalezlopez
• 0
0
Votes
4
Replies
497
Views
GO Analysis Clarification using GOstats using hyperGTest()
RNA-Seq
GO
Gene ontology
2.5 years ago
brismiller
• 10
• updated 2.5 years ago
EagleEye
6.4k
2
Votes
4
Replies
1.1k
Views
P-value calculation for Gene Ontology Terms
p-value
Gene Ontology
2.5 years ago
nkhan.mscs15seecs
• 40
• updated 2.5 years ago
EagleEye
6.4k
0
Votes
1
Reply
552
Views
GOseq Probability Weight Function Interpretation and Use
goseq
RNA-Seq
gene ontology
2.9 years ago
matt.a.bennett25890
• 0
• updated 2.6 years ago
i.sudbery
4.7k
5
Votes
12
Replies
965
Views
"GOplot" and problem with making an integrated matrix
R
microarray
GO
gene ontology
plot
2.6 years ago
farzaneafzali
• 50
• updated 2.6 years ago
zx8754
7.5k
3
Votes
4
Replies
573
Views
infer top level go category from GO:ID
gene ontology
GO
eggnog-mapper
2.8 years ago
Carambakaracho
♦ 1.2k
• updated 2.8 years ago
Vijay Lakhujani
4.1k
0
Votes
0
Replies
422
Views
MSigDB gene set enrichment analysis
gene ontology
gsea
2.8 years ago
dec986
• 200
4
Votes
1
Reply
2.5k
Views
Construct a Gene Ontology Network
Gene Ontology
Cytoscape
6.0 years ago
s.kheitan
• 40
• updated 2.8 years ago
Biostar
20
1
Vote
1
Reply
877
Views
What is the meaning of the level in groupGO Clusterprofiler ?
RNA-Seq
R
Clusterprofiler
GO
Gene Ontology
2.8 years ago
GuriGuri1565
• 10
1
Vote
9
Replies
944
Views
NM_transcript ID gene identification
rna-seq
gene ontology
panther
refseq
DAVID
2.9 years ago
Abiterkuile
• 20
• updated 2.9 years ago
genomax
68k
0
Votes
0
Replies
444
Views
Infer protein function by Gene ontology (ChIP-seq. dataset)
ChIP-Seq
Gene ontology
2.9 years ago
chiefcat
• 100
0
Votes
2
Replies
467
Views
Gage GO annotations vs Entrez
Gage
gene enrichment
RNA-seq
entrez
gene ontology
2.9 years ago
bsp017
• 20
0
Votes
6
Replies
589
Views
Gene Ontology Terms List
GENE ONTOLOGY
2.9 years ago
vipulbatra.pu
• 0
• updated 2.9 years ago
genomax
68k
3
Votes
1
Reply
1.6k
Views
R's GO.db and Python's go_db gives different ancestors, which is correct?
Gene Ontology
5.4 years ago
Endre Bakken Stovner
• 880
• updated 3.0 years ago
Biostar
20
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