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0
Votes
5
Replies
1.3k
Views
vcf filtering and query
vcf query filter
4.5 years ago
joaofadista • 50 • updated 12 months ago
Biostar 20
0
Votes
4
Replies
230
Views
BCF Tools Filter on 1000Genomes Annotation
bcftools vcftools annotation filter
13 months ago
jon.klonowski • 10
2
Votes
6
Replies
287
Views
How to filter sequencing reads in a fastq file by size?
RNA-Seq Ribo-Seq fastq size filter
13 months ago
Beginner • 0 • updated 13 months ago
emeline.a.favreau • 20
1
Vote
4
Replies
255
Views
Filtering BAM file to include PE reads that did not map, even though their mate did
BAM samtools filter mapping read
14 months ago
nute11a • 0 • updated 14 months ago
Istvan Albert 80k
1
Vote
1
Reply
159
Views
Filter read level data after RNA-seq alignment
RNA-Seq Alignment Filter Reads
15 months ago
mohammedtoufiq91 • 40
0
Votes
5
Replies
449
Views
Filtering Read Quality - Cant remove all reads that have a single base below a threshold
filter fastx quality-score sequencing
18 months ago
tbb21 • 10 • updated 15 months ago
Biostar 20
3
Votes
2
Replies
223
Views
filter gene expression matrix
filter gene expression
16 months ago
Sam • 110 • updated 16 months ago
finswimmer 11k
6
Votes
5
Replies
191
Views
Sequence identity between sequences with different lengths
sequence identity alignment filter mummer
16 months ago
ricardoguerreiro2121 • 20 • updated 16 months ago
Bastien Hervé 4.2k
24
Votes
6
Replies
11k
Views
Filtering Paired End Reads
fastq fastx filter
9.9 years ago
brentp 23k • updated 16 months ago
Biostar 20
7
Votes
6
Replies
1.3k
Views
1000Genome SV integrated map's power for SV filter
1000 genome project structural variation filter
4.1 years ago
michealsmith • 740 • updated 18 months ago
LGMgeo • 90
0
Votes
9
Replies
400
Views
bcftools filtering INFO column issues (empty output)
bcftools filter vcf missing INFO
18 months ago
Molly_K • 50
12
Votes
7
Replies
1.5k
Views
Remove a list of positions form a VCF file
SNP vcf filter
3.6 years ago
shinken123 • 80 • updated 18 months ago
zx8754 7.5k
1
Vote
1
Reply
209
Views
Using repeat region filter post QC
ngs exome filter repeats
18 months ago
zx8754 7.5k • updated 18 months ago
Pierre Lindenbaum 120k
0
Votes
0
Replies
163
Views
Simultaneous vs sequential marker filters
SNP filter order
18 months ago
zvezdoma • 0
0
Votes
2
Replies
224
Views
basic command in bash
RNA-Seq filter grep
18 months ago
luzglongoria • 20
0
Votes
4
Replies
251
Views
Filtering SAM file based on column numbers
SAM FILTER alignment
19 months ago
elena.syp • 0 • updated 19 months ago
Pierre Lindenbaum 120k
16
Votes
3
Replies
2.9k
Views
A Grep For Gene Ontology ?
gene filter
10.1 years ago
Pierre Lindenbaum 120k • updated 21 months ago
RamRS 21k
1
Vote
2
Replies
286
Views
Using one bam file with huge coverage, How to generate several bam files with different coverage
bam filter SNPs caller
21 months ago
tarek.mohamed • 250 • updated 21 months ago
WouterDeCoster 39k
3
Votes
5
Replies
409
Views
Error while trying to filter a .vcf.gz file with a bed.gz file
filter error bed bed file
21 months ago
ricfoz • 30 • updated 21 months ago
RamRS 21k
1
Vote
2
Replies
265
Views
GEO search filtering
geo rnaseq filter
21 months ago
cilgaiscan • 50 • updated 21 months ago
btsui • 290
0
Votes
5
Replies
406
Views
Filter Alt Reads from BAM at List of Known Het Sites
BAM Reads Filter
22 months ago
alongalor • 0
6
Votes
1
Reply
664
Views
(Sanity check) Too many SNPs?
next-gen variant filter
2.6 years ago
rightmirem • 60 • updated 23 months ago
Biostar 20
3
Votes
2
Replies
488
Views
Extracting Cumulative (Rare) Allele Frequencies for a Subset of Variants From a VCF
vcf filter rare variant tests enrichment
23 months ago
maegsul • 140 • updated 23 months ago
Pierre Lindenbaum 120k
0
Votes
0
Replies
509
Views
GOexpress analysis, removing genes with a score of 0?
RNA-Seq GOexpress Expressio set filter remove
23 months ago
draper • 0
6
Votes
6
Replies
441
Views
Filter sam/bam files
GBS sam bam filter samtools
23 months ago
ramesh.8v • 200 • updated 23 months ago
swbarnes2 5.7k
1
Vote
1
Reply
402
Views
Filtering reads on the basis of percentage of ambiguous(N's) characters
fastq RNA-Seq filter
23 months ago
Varun Gupta ♦ 1.1k • updated 23 months ago
Pierre Lindenbaum 120k
1
Vote
4
Replies
1.1k
Views
Extracting genotypes and filtering from a VCF file containing multiple exomes of families
DNA-seq genotype filter vcf exome
2.0 years ago
gradstudentNew • 10 • updated 2.0 years ago
Pierre Lindenbaum 120k
2
Votes
3
Replies
358
Views
Filtering GO terms by neuromuscular processes
go filter protein interactions disease
2.0 years ago
Swimming bird • 10 • updated 2.0 years ago
jean.elbers ♦ 1.1k
2
Votes
1
Reply
260
Views
Using the ranking value to filter
RNA-Seq discosnp discosnp++ variantcalling filter
2.2 years ago
vguerracanedo • 10 • updated 2.2 years ago
pierre.peterlongo • 840
1
Vote
1
Reply
828
Views
How to filter VCF where at least x% of the individuals have DP>=10 and GQ>=20
vcf filter gatk
2.3 years ago
hellbio • 370 • updated 2.3 years ago
Pierre Lindenbaum 120k
0
Votes
1
Reply
533
Views
remove lowly expressed genes by selecting genes that had FPKM > 0
RNA-Seq filter
2.4 years ago
DataFanatic • 130
0
Votes
2
Replies
530
Views
Use Blast for the three species of Leishmania in order to take only the common sequences in fasta file
blast leismania filter sequences fasta
2.5 years ago
dzisis1986 • 20 • updated 2.4 years ago
Biostar 20
2
Votes
3
Replies
593
Views
Filter SNP's for no more than 3 mismatches per 10 bp window
SNP filter mismatch gatk
2.4 years ago
shubhra.bhattacharya • 120 • updated 2.4 years ago
Pierre Lindenbaum 120k
1
Vote
4
Replies
520
Views
Opinion on Quality basecall threshold to use
qual quality vcf filter
2.4 years ago
ricfoz • 30
0
Votes
14
Replies
1.1k
Views
filter multisample vcf based on per-sample average read depth
vcf filter variant call read depth
2.5 years ago
agathejouet • 0 • updated 2.5 years ago
Pierre Lindenbaum 120k
8
Votes
5
Replies
1.2k
Views
Sequence filtration tool
fasta sequence tool filter Tool
2.5 years ago
Eslam Samir • 100
1
Vote
1
Reply
537
Views
problem to filter freq from vcf produced with varscan
varscan2 filter vcf SnpSift
2.5 years ago
fabbri.marco • 0
2
Votes
3
Replies
694
Views
vcf filter dp
vcf filter DP
2.6 years ago
chengyi31000 • 10 • updated 2.6 years ago
RamRS 21k
1
Vote
3
Replies
853
Views
vcf file filter
filter vcf SNPs minor allele homozygotes
2.6 years ago
DataFanatic • 130 • updated 2.6 years ago
Pierre Lindenbaum 120k
0
Votes
1
Reply
1.2k
Views
Help - GATK Variant filtration by AD/DP not working
GATK VariantFiltration Filter VCF
2.6 years ago
manimozhi26 • 0
140 results • Page 1 of 4
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Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
How to install CRISPRCasFinder under Ubuntu without having administrator rights?
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one more maybe
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and another one....
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Just delete.
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