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Showing : clustering • reset
13
Votes
7
Replies
3.4k
Views
Is hierarchical clustering of significant genes 'supervised' or 'unsupervised' clustering?
RNA-Seq heatmap clustering
4.1 years ago
steve ♦ 2.0k • updated 19 months ago
Mozart • 130
3
Votes
2
Replies
147
Views
Adding stack bars beneath a hierarchical clustering tree to describe the percentage of a meta-variable for the occurring clusters
clustering visualization R plotting
19 months ago
arronar • 200
0
Votes
0
Replies
108
Views
How to find number of patients (percentage of given population) having high expression of gene A in given microarray data ?
R gene microarray clustering
20 months ago
yuvanesh • 0
0
Votes
2
Replies
151
Views
clustering from the minimum distance
clustering R
20 months ago
s.kyungyong64 • 10
0
Votes
1
Reply
152
Views
ScRNA Data Clustering, FPKM file, R
RNA-Seq R sequence matrix normalization Clustering
22 months ago
bilalahmed240996 • 0 • updated 20 months ago
Biostar 20
1
Vote
1
Reply
384
Views
Which package to use for clustering with UMAP?
clustering
23 months ago
glabella85 • 0 • updated 20 months ago
steveh • 10
0
Votes
0
Replies
111
Views
Sequence clustering based on provided genetic distances
sequence clustering alignment genetic distance
20 months ago
Gon • 10
0
Votes
0
Replies
206
Views
Correlation heatmaps: use correlation as clustering distance or not?
heatmap RNA-Seq clustering
21 months ago
CuriousGuy • 20
0
Votes
1
Reply
229
Views
WGCNA Eigengene interpretation
WGCNA Eigengene clustering
21 months ago
rsafavi • 40
0
Votes
3
Replies
171
Views
How to rank subclusters of a gene co-expression network identifed through community detection algorithm in igraph R package
R gene coexpression network clustering
21 months ago
aiswaryabioinfo • 10
7
Votes
7
Replies
246
Views
How to cluster drugs by up/down gene lists?
gene drug clustering
22 months ago
Antony • 0 • updated 22 months ago
Jean-Karim Heriche 19k
0
Votes
3
Replies
612
Views
Clustering by sequence alignments
dna alignment clustering
3.8 years ago
bbb • 60 • updated 22 months ago
Biostar 20
0
Votes
2
Replies
141
Views
RadSeq and short read
RadSeq Illumina Clustering
22 months ago
gbl1 • 70
4
Votes
0
Replies
1.9k
Views
Tool: Clustering of short peptide sequences
peptide clustering phage display Tool
22 months ago
jockbanan • 380
1
Vote
5
Replies
281
Views
Dunn Index for Clusters from scRNA-Seq
scRNA-Seq clustering dunn index scater scran
22 months ago
hkarakurt • 50
33
Votes
8
Replies
14k
Views
7 follow
Clustering Gene Expression For Time Course Rna-Seq Data
rna-seq clustering sequencing
8.2 years ago
Abhi ♦ 1.5k • updated 22 months ago
sabaghianamir70 • 0
2
Votes
2
Replies
326
Views
TPM and TMM, which should I use for clustering?
tpm tmm clustering
22 months ago
demoraesdiogo2017 • 10 • updated 22 months ago
Charles Warden 6.8k
0
Votes
1
Reply
304
Views
CNVkit Heatmap samples clustering
cnv cnvkit heatmap clustering
23 months ago
jim.paredes • 0 • updated 23 months ago
Eric T. ♦ 2.4k
5
Votes
2
Replies
334
Views
Clusters moving for same dataset and code using tSNE
tSNE Seurat Clustering scRNAseq
23 months ago
chilifan • 70 • updated 23 months ago
i.sudbery 4.7k
2
Votes
4
Replies
320
Views
Silhouette Plots for Clustering Quality (Multiple Algorithm)
R Clustering RNA-Seq scRNA-Seq
23 months ago
hkarakurt • 50
2
Votes
2
Replies
250
Views
What does cluster number in ClusterMaker represent?
cytoscape clustering clustermaker network
24 months ago
Arindam Ghosh • 160 • updated 23 months ago
scooter • 80
1
Vote
3
Replies
713
Views
Clustering program based on NJ phylogeny
clustering protein NJ Phylogeny
3.3 years ago
kgbenn123 • 10 • updated 23 months ago
gbl1 • 70
4
Votes
6
Replies
5.6k
Views
Pvclust:Error In Clustering
clustering r
6.8 years ago
Diana • 780 • updated 2.0 years ago
dmitry.pesko • 0
1
Vote
1
Reply
359
Views
Gene correlation analysis after deseq2
deseq2 correlation clustering
2.0 years ago
Biogeek • 350 • updated 2.0 years ago
dqz377977905 • 0
3
Votes
5
Replies
329
Views
CD-HIT results without sorting by length
clustering CD-HIT sort length
2.1 years ago
Anand Rao • 210
2
Votes
1
Reply
259
Views
Unix command-line alternatives to GenomeStudio's clustering?
genotyping clustering
2.1 years ago
kynnjo • 20
1
Vote
2
Replies
247
Views
Cluster plots from categorical clustering
R clustering
2.1 years ago
jmah • 10
0
Votes
2
Replies
1.0k
Views
Redundant Group Of Proteins.
clustering
6.9 years ago
thiagomafra • 70 • updated 2.1 years ago
Raony Guimarães • 990
1
Vote
8
Replies
461
Views
get different heatmap from website and R
R clustering heatmap excel
2.3 years ago
ebrahimi.re67 • 0 • updated 2.1 years ago
Biostar 20
4
Votes
1
Reply
292
Views
WGCNA threshold values
WGCNA THRESHOLD CLUSTERING RNAseq
2.1 years ago
priyankaraina10 • 10 • updated 2.1 years ago
Kevin Blighe 43k
7
Votes
2
Replies
2.3k
Views
Comparison Of Biological Graphs/Networks
graph clustering network
7.3 years ago
tigeradab • 50 • updated 2.1 years ago
kuntal.bhusan • 20
49
Votes
47
Replies
5.6k
Views
8 follow
Tutorial: Clustering of DAVID gene enrichment results from gene expression studies
david clustering gene ontology enrichment Tutorial
2.9 years ago
Kevin Blighe 43k • updated 2.2 years ago
skylinesky • 0
6
Votes
2
Replies
786
Views
How to perform PCA on gene expression?
PCA qPCR Clustering Marker gene Gene expression
2.2 years ago
Thomas B. • 10 • updated 2.2 years ago
ahmad mousavi • 430
10
Votes
7
Replies
472
Views
How to "Randomly" Select Genes
R RNA-Seq clustering gene
2.2 years ago
Ark • 70
0
Votes
0
Replies
478
Views
How to create a dendrogram of clusters and reconstruct phylogenetic relationship
R alignment clustering phylogenetics
2.2 years ago
deolg • 0
0
Votes
1
Reply
250
Views
Is there any website that shows the cell type for a given marker list?
biomarker cell clustering
2.3 years ago
Batu • 150
1
Vote
4
Replies
478
Views
How to make cluster from gene read count?
RNA-Seq clustering R deseq2 edgeR
2.3 years ago
ahmad mousavi • 430 • updated 2.3 years ago
Chirag Parsania ♦ 1.4k
3
Votes
12
Replies
1.0k
Views
RNA-seq replicates not clustering
RNA-Seq clustering
2.4 years ago
sckinta • 510 • updated 2.3 years ago
Biostar 20
2
Votes
3
Replies
524
Views
Group/Cluster tumor samples in an RNA-Seq dataset for survival analysis, based on the expression of a small gene signature
RNA-Seq gene signature survival clustering R
2.3 years ago
svlachavas • 560 • updated 2.3 years ago
Kevin Blighe 43k
0
Votes
3
Replies
595
Views
Triangle heatmap with heatmap.2
heatmap.2 Triangle Clustering
2.3 years ago
Poorya Parvizi • 40
0
Votes
0
Replies
507
Views
degPatterns: Error in lower.to.upper.tri.inds(n) : 'n' must be >= 2
RNA-seq clustering
2.4 years ago
salamandra • 200
26
Votes
6
Replies
13k
Views
Self-Learning Gene-Expression K-Means Clustering In R
r clustering code
10.6 years ago
Eric Normandeau 10k • updated 2.4 years ago
RamRS 21k
13
Votes
6
Replies
3.2k
Views
Selecting Nodes Of High Correlation In A Tree
microarray gene clustering
10.7 years ago
toni ♦ 2.1k • updated 2.4 years ago
RamRS 21k
4
Votes
8
Replies
462
Views
Tool that can split genes into groups with similar expression pattern overtime and plot them?
RNA-Seq clustering
2.4 years ago
salamandra • 200 • updated 2.4 years ago
exin • 50
0
Votes
1
Reply
715
Views
Should I include multi-mapped reads for analysis that does not require significant differential expression of genes?
RNA-Seq clustering heatmap HTseq multi-mapped
2.6 years ago
k.woolf • 0 • updated 2.5 years ago
Vincent Laufer ♦ 1.0k
1
Vote
3
Replies
403
Views
Hierarchical clustering evaluation
clustering gene expression
2.5 years ago
teabonng • 20 • updated 2.5 years ago
Jean-Karim Heriche 19k
2
Votes
1
Reply
506
Views
dynamic tree cut
clustering dynamictreecut
2.5 years ago
teabonng • 20 • updated 2.5 years ago
Jean-Karim Heriche 19k
4
Votes
6
Replies
506
Views
plotting the expression profiles of different conditions in same plot
Single cell heatmap R Clustering
2.6 years ago
Za • 120 • updated 2.5 years ago
Biostar 20
4
Votes
6
Replies
474
Views
Visualizing model-based clustering with fviz_mclust
factoextra clustering
2.6 years ago
lessismore • 630 • updated 2.6 years ago
Kevin Blighe 43k
0
Votes
4
Replies
450
Views
Cluster RNA sequences from fasta alignment by identity threshold
sequences identity RNA clustering RNA alignment
2.7 years ago
filip7grudzien • 0 • updated 2.6 years ago
Biostar 20
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