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47 results • Page
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Showing :
cDNA
•
reset
2
Votes
18
Replies
855
Views
Help with finding introns
cDNA
genome
introns
3.6 years ago
elisheva
• 70
• updated 19 months ago
Biostar
20
0
Votes
2
Replies
188
Views
In MAF files, does c_position is equivalent to cDNA_positions?
MAF
maf
genome
GDC
cDNA
21 months ago
mariamcurbelo2061
• 0
0
Votes
4
Replies
190
Views
How to identify long reads coming from ligated cDNAs before sequencing ?
minimap2
ONT
nanopore
alignment
cDNA
23 months ago
Florian Bernard
• 50
4
Votes
2
Replies
235
Views
Need help finding a primer for a sequence
primer
cDNA
PCR
2.1 years ago
sagar
• 0
• updated 2.1 years ago
ATpoint
17k
1
Vote
2
Replies
289
Views
How to find CDS in Gene Profile?
cDNA
CDS
Genbank
2.1 years ago
sagar
• 0
• updated 2.1 years ago
genomax
68k
3
Votes
3
Replies
294
Views
if I have a SNP on the cDNA level, how can I find the corresponding mutation on the protein level?
vcf
cDNA
2.2 years ago
roanzaid
• 0
• updated 2.2 years ago
finswimmer
11k
6
Votes
0
Replies
477
Views
Tool:
pinfish: tools to annotate genomes using long read transcriptomics data
RNA-Seq
cDNA
nanopore
isofrom
annotation
Tool
2.3 years ago
Botond Sipos
♦ 1.7k
2
Votes
9
Replies
350
Views
Is the union of cDNA sequences the exome?
DNA-seq
cDNA
exome
2.3 years ago
Bioaln
• 310
• updated 2.3 years ago
lieven.sterck
5.1k
5
Votes
7
Replies
1.5k
Views
Length(Ucsc/Ensgene) % 3 != 0
ucsc
cdna
protein
sequence
translation
10.7 years ago
Pierre Lindenbaum
120k
• updated 2.4 years ago
RamRS
21k
2
Votes
2
Replies
317
Views
mRNA transcript sequence analysis
mRNA
cDNA
2.5 years ago
alexille5640
• 10
• updated 2.5 years ago
h.mon
25k
0
Votes
1
Reply
505
Views
TransDecoder: Filtering *_longest_orfs.pep Results
next-gen
sequence
cDNA
TransDecoder
transcriptome
2.5 years ago
mduhon8
• 0
• updated 2.5 years ago
h.mon
25k
0
Votes
0
Replies
488
Views
cDNA/EST/Random library selection for transcriptome assembly
RNA-Seq
cDNA
EST
sequencing
assembly
2.7 years ago
liorglic
• 50
0
Votes
1
Reply
581
Views
Mapping changes in the Amino Acid sequence based on cDNA
cdna
amino acid
mapping
sequence
3.4 years ago
demell.april1
• 0
0
Votes
3
Replies
577
Views
FTP for cDNAs\mRNAs
FTP
cDNA
mRNA
3.7 years ago
elisheva
• 70
• updated 3.7 years ago
Jean-Karim Heriche
19k
0
Votes
1
Reply
675
Views
Mapping from cDNA coordinates to genomic space
GenomicFeatures
GRanges
cDNA
transcript
3.9 years ago
longoka
• 30
• updated 3.8 years ago
Biostar
20
1
Vote
3
Replies
645
Views
Is there anything with a poly-A tail that isn't included in Ensembl's cDNA reference?
ensembl
cdna
3.9 years ago
ericbrenner
• 0
7
Votes
1
Reply
1.1k
Views
Designing a Primer
cDNA
primer
clone
homolog
4.0 years ago
MolecularBiologyStudent
• 20
• updated 4.0 years ago
WouterDeCoster
39k
1
Vote
1
Reply
796
Views
Getting plant full length cDNA sequences from NCBI
cDNA
BLAST
NCBI
Update
4.0 years ago
abhijit.synl
• 50
• updated 4.0 years ago
apa@stowers
• 420
1
Vote
3
Replies
899
Views
One sequence with multiple CDS start and end annotation with BioMart Browser
Ensembl
Biomart
CDS
CDNA
4.1 years ago
david.a.mancilla
• 0
• updated 4.1 years ago
WouterDeCoster
39k
1
Vote
1
Reply
931
Views
How to (1) combine two loci into one gene to correct genome and (2) re-run Cuffdiff to find correct FPKM of combined gene
genomics
transcriptomics
RNA-Seq
RNA
cDNA
4.3 years ago
michael.nagle
• 100
2
Votes
1
Reply
980
Views
choice of reference for transcriptome assembly
RNA-Seq
Assembly
cDNA
CDS
4.4 years ago
SJ Basu
• 30
• updated 4.3 years ago
Biostar
20
63
Votes
8
Replies
33k
Views
6 follow
Why Do You Need To Use Cdna For Rna-Seq?
rna-seq
cdna
8.3 years ago
Justin
• 440
• updated 4.4 years ago
SeqFreak
• 0
1
Vote
2
Replies
1.1k
Views
Explanation of how to efficiently use the TAIR database for finding homologs of cDNA? BLAST, FASTA, Wu-BLAST
genome
arabidopsis
fasta
cDNA
ESTs
4.7 years ago
zak4.0
• 0
• updated 4.7 years ago
Denise - Open Targets
♦ 5.0k
38
Votes
8
Replies
7.9k
Views
9 follow
Multiple Sequence Alignment For Cdnas
cdna
alignment
multiple
clustalw
10.3 years ago
Haibao Tang
3.0k
• updated 4.7 years ago
kissaj
• 90
1
Vote
1
Reply
1.9k
Views
Converting HGVS cDNA notations to chromosome position
Open
hgvs
convert
cdna
5.0 years ago
pastatonio78
• 30
• updated 5.0 years ago
Atu
• 0
5
Votes
4
Replies
1.7k
Views
Software To Graphically Represent The Splicing In A Simple Way
splicing
cdna
map
7.6 years ago
Anima Mundi
♦ 2.4k
• updated 5.6 years ago
Biostar
20
2
Votes
2
Replies
5.5k
Views
map cDNA position on genomic position
sequencing
mutation
cDNA
genome
6.3 years ago
User6891
• 250
• updated 6.3 years ago
Denise - Open Targets
♦ 5.0k
0
Votes
0
Replies
1.9k
Views
If a gene is listed on AceView as having no NCBI NM, and it is annotated as a lncRNA, is it still possible that a protein is transcribed from it?
AceView
cDNA
6.5 years ago
amckenz
• 0
2
Votes
11
Replies
5.5k
Views
calculating the total length of cDNA for a given gene
gene
cDNA
database
6.7 years ago
Quak
• 300
• updated 6.7 years ago
Irsan
♦ 6.9k
2
Votes
1
Reply
1.5k
Views
Is It Necessary To Separate Prokaryotic And Eukaryotic Rna For Ngs From An Environmental Sample?
rna
ngs
cdna
7.2 years ago
Kathia
• 20
• updated 6.8 years ago
Biostar
20
0
Votes
0
Replies
1.2k
Views
Help finding secondary structures and post-transcriptional modifications in RNA?
RNA-Seq
splicing
cDNA
secondary structures
6.8 years ago
jsc33194
• 0
2
Votes
6
Replies
2.8k
Views
Predicting Full Length Cdna Sequences From A Fasta Sequence File
cdna
7.3 years ago
Prakki Rama
♦ 2.3k
2
Votes
6
Replies
3.0k
Views
Downloading Complete Cds Data Of A Genome From Unigene And Refseq
cds
cdna
refseq
7.4 years ago
Ritvik
• 30
• updated 7.4 years ago
Devon Ryan
90k
3
Votes
2
Replies
1.7k
Views
Plasmid Mapping Software That Allows Some Command Line Usage
map
cdna
command-line
software
7.4 years ago
Anima Mundi
♦ 2.4k
• updated 7.4 years ago
Cliff Beall
• 450
0
Votes
7
Replies
2.7k
Views
Software For Aligning Cdna Onto Reference Genomic Sequences To Retrieve Introns
cdna
intron
reference
alignment
database
software
est
7.6 years ago
atapee
• 10
• updated 7.6 years ago
Pierre Lindenbaum
120k
0
Votes
2
Replies
1.5k
Views
How To Convert Large Number Of Records In A Vcf File To Have A Cdna Naming?
cdna
vcf
7.7 years ago
alex
• 180
• updated 7.7 years ago
Devon Ryan
90k
1
Vote
5
Replies
2.1k
Views
Permutation Test For Cdna Microarray
microarray
cdna
7.9 years ago
Raygozak
♦ 1.3k
• updated 7.9 years ago
Sean Davis
25k
1
Vote
1
Reply
2.1k
Views
How To Interpret The "Rank Of Hsp" In The Blast Output
cdna
8.2 years ago
Woa
♦ 2.7k
• updated 8.2 years ago
SES
8.2k
1
Vote
6
Replies
3.2k
Views
Program To Align Cdna And Dna Genomic
alignment
cdna
dna
8.5 years ago
Daniel Fernández
• 40
• updated 8.5 years ago
Vitis
♦ 2.1k
1
Vote
3
Replies
2.5k
Views
Rna Seq Procedure For Generating Cdna Library
cdna
rna
8.9 years ago
Varun Gupta
♦ 1.1k
• updated 8.8 years ago
Mnkyboy
• 60
2
Votes
7
Replies
2.1k
Views
Basic Bioinformatics Analysis For Cdna
cdna
9.3 years ago
Elmo
• 110
• updated 8.9 years ago
Newvin
• 340
6
Votes
11
Replies
1.8k
Views
Pattern Matching - Biological Compatibility Between Query Reads And Reference Sequence?
illumina
rna
r
mirna
cdna
9.0 years ago
Agatha
• 340
• updated 9.0 years ago
Jeremy Leipzig
18k
15
Votes
5
Replies
1.7k
Views
How To Distinguish Two Species From Est Data?
cdna
phylogeny
9.3 years ago
Andyh
• 90
• updated 9.3 years ago
John St. John
♦ 1.1k
8
Votes
6
Replies
1.6k
Views
Translating A Mitochondrial Cdna
translation
mitochondria
cdna
ucsc
9.3 years ago
Pierre Lindenbaum
120k
• updated 9.3 years ago
Neilfws
48k
6
Votes
5
Replies
2.2k
Views
Alternative To Wise2: Other Packages For Mapping Proteins To Genomic And Cdna Sequence Data.
protein
genomics
cdna
9.3 years ago
Burlappsack
• 660
• updated 9.3 years ago
Lhl
• 730
2
Votes
8
Replies
2.1k
Views
Remove Noncoding Regions From Cdna Sequences
cdna
utr
alignment
9.5 years ago
Katy
• 10
• updated 9.5 years ago
Vitis
♦ 2.1k
4
Votes
5
Replies
2.3k
Views
Blast Parameters For Searching Rna Database
blast
rna
cdna
9.9 years ago
Woa
♦ 2.7k
• updated 9.9 years ago
Peter
• 0
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