This is a beta test.
Latest News Jobs Tutorials Tags Users New Post
New Post Latest News Jobs Tutorials Tags Users
Limit to: all time
all time today this week this month this year
39 results • Page 1 of 1
Sort by: Rank
Rank Views Votes Replies
Showing : bedGraph • reset
0
Votes
8
Replies
2.9k
Views
Overlapping regions in a BedGraph file
0 Votes | 8 Replies
3.9 years ago Sam • 70 • updated 6 months ago Simply Bioinformatics • 150
1
Vote
4
Replies
176
Views
Obtain ChIPseq peaks from a bedgraph file with continuous regions
1 Vote | 4 Replies
6 months ago mmaqueda • 0 • updated 6 months ago ATpoint 17k
5
Votes
4
Replies
1.6k
Views
Generating a bedgraph from a scored bed file
5 Votes | 4 Replies
4.7 years ago Matt Corley • 40 • updated 8 months ago Biostar 20
0
Votes
1
Reply
108
Views
Off topic: How to convert chromosomal coordinates (Bedgraph) into gene symbols?
0 Votes | 1 Reply
9 months ago LuisNagano • 10
0
Votes
3
Replies
358
Views
Seqmonk: Bedgraph as input ? (EPIC methylation array data)
0 Votes | 3 Replies
11 months ago Ankit • 100 • updated 10 months ago Charles Warden 6.8k
2
Votes
3
Replies
213
Views
Transform Bedgraph counts into Gene Counts (DESeq2 input)
2 Votes | 3 Replies
10 months ago LuisNagano • 10 • updated 10 months ago gocougs • 20
4
Votes
6
Replies
328
Views
Visualizing CNV data based from bed or bedgraph format
4 Votes | 6 Replies
10 months ago sm.hashemin • 60
1
Vote
3
Replies
245
Views
bedgraph file format in IGV: good for observing CNV ?
1 Vote | 3 Replies
12 months ago Pin.Bioinf • 240
1
Vote
2
Replies
359
Views
Reformating bedGraph files in shell script
1 Vote | 2 Replies
15 months ago m93 • 150 • updated 13 months ago Biostar 20
7
Votes
10
Replies
1.6k
Views
BigWig library for Java
7 Votes | 10 Replies
5.1 years ago bow • 790 • updated 13 months ago holgerbrandl • 30
3
Votes
2
Replies
317
Views
variableStep vs fixedStep for range formats
3 Votes | 2 Replies
15 months ago m93 • 150 • updated 15 months ago RamRS 21k
5
Votes
8
Replies
553
Views
Output bedGraph from genomeCoverageBed is missing "chr"
5 Votes | 8 Replies
15 months ago m93 • 150 • updated 15 months ago RamRS 21k
7
Votes
8
Replies
571
Views
Stranded RNA-seq data visualization in UCSC
7 Votes | 8 Replies
16 months ago marina.v.yurieva • 480 • updated 16 months ago Rob 3.3k
0
Votes
1
Reply
908
Views
"olambda_treat_afterfiting_all" output file from MACS
0 Votes | 1 Reply
5.0 years ago akivab2 • 100 • updated 16 months ago Biostar 20
0
Votes
1
Reply
204
Views
What should you do if you don't know the wig file is based on GRCH37 or GRCH38?
0 Votes | 1 Reply
16 months ago Shicheng Guo ♦ 7.5k
1
Vote
8
Replies
480
Views
bedGraph compress tools
1 Vote | 8 Replies
16 months ago marina.v.yurieva • 480
1
Vote
4
Replies
696
Views
How to extrach gene names and peaks from BedGraph or BigWig files
1 Vote | 4 Replies
19 months ago hkarakurt • 50 • updated 19 months ago Devon Ryan 90k
5
Votes
8
Replies
1.6k
Views
plot a bedgraph
5 Votes | 8 Replies
20 months ago sacha ♦ 1.7k
0
Votes
0
Replies
470
Views
genome-wide gene occupancy profiles
0 Votes | 0 Replies
2.3 years ago Assa Yeroslaviz ♦ 1.2k
5
Votes
6
Replies
924
Views
How to merge bedGraph records which are next to each other and have the same score?
5 Votes | 6 Replies
2.3 years ago James Ashmore ♦ 2.6k • updated 2.3 years ago geek_y 9.7k
2
Votes
2
Replies
809
Views
Effectively search for positions in large bedgraph files using python (or other language if needed)
2 Votes | 2 Replies
2.4 years ago DVA • 520 • updated 2.4 years ago Alex Reynolds 28k
4
Votes
3
Replies
1.2k
Views
Visualising BedGraph files on UCSC [custom tracks]
4 Votes | 3 Replies
2.5 years ago anu014 • 160 • updated 2.5 years ago arup ♦ 1.3k
2
Votes
3
Replies
2.8k
Views
Difference between 'bedgraph' and 'bw' files
2 Votes | 3 Replies
2.8 years ago biotech • 540 • updated 2.8 years ago igor 7.7k
0
Votes
1
Reply
1.8k
Views
How to create a bedGraph file for broadPeak peak caller?
0 Votes | 1 Reply
3.9 years ago mrs.hope • 10 • updated 3.0 years ago 569497735 • 0
0
Votes
3
Replies
1.1k
Views
Merge hundreds bedgraph files with unionbedg in one bash line
0 Votes | 3 Replies
3.1 years ago Shicheng Guo ♦ 7.5k
0
Votes
4
Replies
1.5k
Views
Relationship of bedGraph to wig.
0 Votes | 4 Replies
3.3 years ago ariel.balter • 140 • updated 3.3 years ago Devon Ryan 90k
1
Vote
2
Replies
950
Views
Is there any way to determine whether my sequenced data uses 0- or 1-based coordinates?
1 Vote | 2 Replies
3.7 years ago biohack92 • 150 • updated 3.7 years ago Alex Reynolds 28k
3
Votes
3
Replies
1.1k
Views
How do I replace a value used in script with a range of values in a file?
3 Votes | 3 Replies
3.7 years ago josephmccarter1 • 70 • updated 3.7 years ago tomc • 80
0
Votes
1
Reply
970
Views
Two UCSC bedgraph tracks next to each other
0 Votes | 1 Reply
4.3 years ago kevin.wyatt.mcmahon • 0 • updated 3.7 years ago Chirag Nepal ♦ 2.2k
1
Vote
4
Replies
908
Views
Is there a simple way to get the max coverage of a bedgraph file in python?
1 Vote | 4 Replies
3.7 years ago rioualen • 360 • updated 3.7 years ago Alex Reynolds 28k
13
Votes
19
Replies
2.2k
Views
Sum column until a certain value is reached then print that line
13 Votes | 19 Replies
3.8 years ago josephmccarter1 • 70 • updated 3.8 years ago John 12k
8
Votes
7
Replies
7.1k
Views
Bed to BedGraph
8 Votes | 7 Replies
3.8 years ago abc • 30 • updated 3.8 years ago dally • 180
6
Votes
10
Replies
1.9k
Views
UCSC BedGraph Issue
6 Votes | 10 Replies
4.5 years ago mbio.kyle • 330 • updated 4.5 years ago Maximilian Haeussler ♦ 1.3k
0
Votes
0
Replies
1.5k
Views
GEM mappability > wig/bedgraph : how to interprete
0 Votes | 0 Replies
4.7 years ago mehran.karimzade • 160
0
Votes
0
Replies
980
Views
Tool: tools to get coverage of a particular transcript from bedgraph
0 Votes | 0 Replies
4.9 years ago manauwer_raza • 0
8
Votes
3
Replies
2.2k
Views
viewing BED Graph files on the IGB
8 Votes | 3 Replies
5.0 years ago akivab2 • 100 • updated 5.0 years ago Ann ♦ 2.2k
2
Votes
2
Replies
1.3k
Views
"mask" values in a bedgraph
2 Votes | 2 Replies
5.5 years ago A. Domingues ♦ 2.1k
8
Votes
5
Replies
11k
Views
how to visualize the bedgraph and bed file
8 Votes | 5 Replies
5.5 years ago Raghav • 100 • updated 5.5 years ago Alex Reynolds 28k
3
Votes
1
Reply
3.6k
Views
Bedgraph to bed file conversion
3 Votes | 1 Reply
5.6 years ago Aishwarya.Kulkarni • 20 • updated 5.6 years ago Alex Reynolds 28k
39 results • Page 1 of 1
Recent Votes
Answer: test question 1
Answer: test question 1
Markdown
Comment: Markdown
New test post with the AJAX system
Answer: Markdown
Markdown
A: Which Are The Best Programming Languages For A Bioinformatician?
A: Which Are The Best Programming Languages For A Bioinformatician?
Answer: Which Are The Best Programming Languages For A Bioinformatician?
Recent Locations • All
State College, USA, 13 hours ago
University Park, 13 hours ago
United States, 18 hours ago
Puerto Rico, 21 hours ago
Minneapolis, MN, 1 day ago
Recent Awards • All
Appreciated to finswimmer 11k
Appreciated to finswimmer 11k
Appreciated to finswimmer 11k
Appreciated to finswimmer 11k
Appreciated to finswimmer 11k
Appreciated to finswimmer 11k
Appreciated to finswimmer 11k
Appreciated to finswimmer 11k
Autobiographer to lilyjacob987 • 0
Autobiographer to kapoormalvika912 • 0
Recent Replies
Answer: " testing dfg " by Natay Aberra 0
testing the autocomplete with mentioned users @Natay-Aberra @natay
Comment: " testing dfg " by Natay Aberra 0
Thanks a lot!
Comment: " testing dfg " by RamRS 21k
Drag and drop is frigging ***AWESOME***
Answer: " testing dfg " by Natay Aberra 0
Hello, test drag and drop of comments
Comment: " testing dfg " by RamRS 21k
Testing twitter embedding: https://www.twitter.com/statnews/status/656174802911129600 https://twitter.com/statnews/status/660506539762057…
Answer: test question 1 by Linda • 20
more than 10 characters
Comment: Which Are The Best Programming Languages For A Bioinformatician? by Digital • 0
https://www.digitalumbrellas.com/ Welcome to Digital Umbrella Pakistan, USA, UK. A Service company you can Depend on
Comment: " testing dfg " by RamRS 21k
Testing highlighting functionality. Using `<span style="background-color: #FFFF00">`: <span style="background-color: #FFFF00">Span trial</…
Comment: " testing dfg " by RamRS 21k
Testing <u>underline</u> functionality.
Comment: " testing dfg " by RamRS 21k
Testing comment with parentheses in URL: (this URL: https://www.ncbi.nlm.nih.gov/search/all/?term=BRCA1%20AND%20(Human%20OR%20Mouse))
Comment: get gene biotype for hg38 refseq by Natay Aberra 0
test the bumping
Comment: get gene biotype for hg38 refseq by genomax 68k
http://test.biostars.org/accounts/profile/2/ http://test.biostars.org/p/34/
Comment: New test post with the AJAX system by Natay Aberra 0
Yeah we will probably end up doing that.
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/accounts/profile/18713/ http://test.biostars.org/p/p371267/#p371295 test the bumping
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/p/p371285/ http://test.biostars.org/accounts/profile/user-2/
Powered by the version 1.6