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Showing : WGS • reset
3
Votes
4
Replies
142
Views
BWA MEM Definition of a Primary Alignment
alignment bwa mem wgs hts
11 months ago
QVINTVS_FABIVS_MAXIMVS ♦ 2.2k • updated 11 months ago
d-cameron ♦ 2.0k
6
Votes
4
Replies
165
Views
Download All The Bacterial Genomes of Pseudomonas aeruginosa From Ncbi
wgs ngs bacterial Genomics
12 months ago
Optimist • 60 • updated 12 months ago
Joe 12k
3
Votes
1
Reply
144
Views
Country wise list of bacterial genome sequences
Bacterial genome wgs ngs
12 months ago
Optimist • 60 • updated 12 months ago
genomax 68k
4
Votes
4
Replies
177
Views
Kmer selection for bacterial WGS denovo assembly using SPAdes or SOAP-denovo
Assembly SPAdes Soap-denovo WGS bacterial
12 months ago
bioinforesearchquestions • 230 • updated 12 months ago
h.mon 25k
0
Votes
0
Replies
93
Views
Estimate effect size from region-based variants tests
RVAS WGS GWAS
12 months ago
reds.nik • 40
2
Votes
1
Reply
117
Views
Identify AMR genes from WGS bacterial sequence
WGS bacteria AMR genome assembly
12 months ago
bioinforesearchquestions • 230 • updated 12 months ago
ctseto • 70
0
Votes
1
Reply
141
Views
How to get actual location of CNV from CNVKit
cnvkit cnv wgs
12 months ago
rabio • 0 • updated 12 months ago
MatthewP • 110
0
Votes
0
Replies
123
Views
Why are there multiple bax/fastq files associated with my PacBio run?
PacBio WGS genome sequencing Forum
12 months ago
nickvpinkham • 0 • updated 12 months ago
Asaf 5.6k
4
Votes
6
Replies
1.9k
Views
How to call BBMap, SAMTools and GATK from Python or Ruby?
software sequencing wgs
4.6 years ago
vassialk • 190 • updated 12 months ago
Roman Luštrik • 70
25
Votes
19
Replies
483
Views
Getting the number of SNPs in some ranges
R wgs CNV LINUX
13 months ago
F ♦ 3.4k • updated 13 months ago
RamRS 21k
0
Votes
2
Replies
168
Views
Creating marker file for GICTIC2
GISTIC2 Copy number Segmentation WGS
13 months ago
F ♦ 3.4k • updated 13 months ago
RamRS 21k
2
Votes
3
Replies
174
Views
How to get BLAST wgs database
BLAST wgs
13 months ago
qwertzio • 0 • updated 13 months ago
genomax 68k
1
Vote
4
Replies
204
Views
Running time in different callers
mutect varscan SNV WGS
13 months ago
F ♦ 3.4k
2
Votes
5
Replies
224
Views
Creating a PON in GATK
GATK wgs mutect2
13 months ago
F ♦ 3.4k
1
Vote
0
Replies
177
Views
AllMine, a flexible pipeline for allele mining
snp RNA-Seq WGS pipeline Tool
13 months ago
thomasbersez • 20
3
Votes
5
Replies
189
Views
Loss of reads during realignment bam
gatk bwa wgs fastQValidator samtools
13 months ago
mb2subi • 0
0
Votes
0
Replies
118
Views
What is the most recommended software to construct a genetic map with SNP markers for a sugarcane cultivar?
sugarcane WGS Bi-parental population
13 months ago
giannkas1 • 0 • updated 13 months ago
h.mon 25k
6
Votes
9
Replies
221
Views
How to separate chrY from a WGS vcf file?
tabix dantelabs wgs yfull bam
13 months ago
krt • 0
6
Votes
8
Replies
352
Views
Problem with vcf2maf
maf vcf wgs path
13 months ago
F ♦ 3.4k • updated 13 months ago
RamRS 21k
2
Votes
3
Replies
162
Views
identifying transgene insertion site in WGS
WGS insertion site trangene de-novo soap
13 months ago
Assa Yeroslaviz ♦ 1.2k • updated 13 months ago
d-cameron ♦ 2.0k
0
Votes
2
Replies
202
Views
Genotype file supporting gatk CalculateGenotypePosteriors
WGS GATK Genotyping
14 months ago
gwotto • 0
8
Votes
20
Replies
435
Views
Getting read depth for normal and tumour
R WGS vcf
14 months ago
F ♦ 3.4k
1
Vote
1
Reply
250
Views
Extracting information from gatk VariantFiltration output
gatk WGS
14 months ago
F ♦ 3.4k
2
Votes
3
Replies
180
Views
Visualizing called somatic copy number variation
WGS CNV
14 months ago
F ♦ 3.4k
5
Votes
5
Replies
236
Views
Do you recommend marking duplicates for WGS or WES?
WGS duplicate picard rmdup NGS
14 months ago
jpuntomarcos • 30 • updated 14 months ago
Charles Warden 6.8k
4
Votes
6
Replies
202
Views
Non zero existing of scatngs
WGS software error scatngs
14 months ago
F ♦ 3.4k
0
Votes
1
Reply
145
Views
Should I use the same reference indexing command of bwa for WGS and WES analysis?
bwa mem indexing WGS WES
14 months ago
maria2019 • 30 • updated 14 months ago
finswimmer 11k
13
Votes
23
Replies
339
Views
How I deal with this big data
WGS transfer
14 months ago
F ♦ 3.4k • updated 14 months ago
ATpoint 17k
1
Vote
0
Replies
367
Views
Bioinformatician NGS Data/Genomics in Berlin
wgs ngs genomics Job
14 months ago
Manuel • 370
0
Votes
3
Replies
275
Views
Splitting .vcf file
WGS vcftools
15 months ago
F ♦ 3.4k
0
Votes
6
Replies
311
Views
How to access specifically 30x NA12878 sequencing runs
giab benchmark fastq wgs data-access
15 months ago
Fungsten • 0 • updated 15 months ago
Pierre Lindenbaum 120k
0
Votes
9
Replies
315
Views
Removing or not removing the duplicates in .bam file
picard GATK RNA-Seq WGS
15 months ago
F ♦ 3.4k
4
Votes
13
Replies
336
Views
Variant calling from RNA-seq?
WGS RNA-Seq
15 months ago
F ♦ 3.4k
12
Votes
20
Replies
398
Views
Getting these files from different parts of genome
BED WGS genome SNP R
15 months ago
F ♦ 3.4k
19
Votes
22
Replies
479
Views
Removing duplicated mutations from a txt
WGS VCF mutation dndscv
15 months ago
F ♦ 3.4k • updated 15 months ago
zx8754 7.5k
4
Votes
14
Replies
346
Views
VCF file filtration
snp WGS VCF bcftools vcftools
15 months ago
jaafari.omid • 40
0
Votes
0
Replies
190
Views
Whole genome amplification+Nanopore of cell line
wgs amplification phi29 nanopore genome
15 months ago
jacke123 • 0
2
Votes
1
Reply
219
Views
Has anyone used MeDuSa: a multi-draft based scaffolder
wgs Bacterial genomics ngs medusa
15 months ago
Optimist • 60 • updated 15 months ago
h.mon 25k
2
Votes
3
Replies
216
Views
Is there a way to segregate Plasmid contigs from Iontorrent WGS data?
Assembly Plasmid WGS Ion torrent
15 months ago
Optimist • 60 • updated 15 months ago
5heikki 8.4k
16
Votes
24
Replies
567
Views
dNdScv error: Zero coding substitutions found in this dataset
dndscv R WGS
15 months ago
F ♦ 3.4k • updated 15 months ago
Inigo Martincorena • 170
287 results • Page 1 of 8
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one more maybe
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights? by Michael 100
and another one....
Comment: How to install CRISPRCasFinder under Ubuntu without having administrator rights? by Michael 100
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Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights? by Michael 100
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Comment: How to deal with the .sra.vdbcache files after downloading a sra file? by ATpoint 17k
Just delete.
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