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Showing : UCSC • reset
1
Vote
8
Replies
159
Views
UCSC different exome sets per each gene
1 Vote | 8 Replies
ucsc exomes gene coordinates
10 months ago
cocchi.e89 • 20 • updated 10 months ago
Luis Nassar • 110
2
Votes
5
Replies
139
Views
Protein coding annotation from UCSC
2 Votes | 5 Replies
ucsc annotation
10 months ago
tim.ivanov.92 • 10 • updated 10 months ago
Luis Nassar • 110
3
Votes
3
Replies
142
Views
How to get known canonical transcript information from UCSC for a specific gencode version
3 Votes | 3 Replies
gencode ucsc canonical transcripts
10 months ago
komal.rathi ♦ 3.4k
2
Votes
4
Replies
131
Views
find transcription factor binding site with small sequence from UCSC
2 Votes | 4 Replies
ucsc bindingsite motif
10 months ago
kdc15 • 30 • updated 10 months ago
geek_y 9.7k
6
Votes
5
Replies
195
Views
How to zoom out to whole genome view in UCSC browser?
6 Votes | 5 Replies
UCSC browser bigWig
10 months ago
msimmer92 • 180
29
Votes
8
Replies
11k
Views
Get chromosome sizes from fasta file
29 Votes | 8 Replies
genome ucsc
4.2 years ago
rioualen • 360 • updated 11 months ago
gbdias • 80
2
Votes
1
Reply
159
Views
how to get gff file bos tau8 from ucsc to import in usegalaxy
2 Votes | 1 Reply
ucsc usegalaxy gff htseq-count
11 months ago
Kian • 40
4
Votes
8
Replies
219
Views
RefGene: how to find the starts and ends of genes?
4 Votes | 8 Replies
refgene ucsc
12 months ago
endrebak • 760 • updated 12 months ago
Luis Nassar • 110
6
Votes
10
Replies
395
Views
Why the list of genes in UCSC "knownGene" table is strikingly different than the list of genes in UCSC "known canonical" table?
6 Votes | 10 Replies
ucsc tablebrowser hg19 bed
13 months ago
Vijay Lakhujani 4.1k
1
Vote
2
Replies
205
Views
manually turn off multiple tracks at once in UCSC browser
1 Vote | 2 Replies
ucsc
14 months ago
fraser518 • 0 • updated 13 months ago
Luis Nassar • 110
0
Votes
3
Replies
245
Views
Count matrix showing different results than UCSC tracks
0 Votes | 3 Replies
ucsc featurecounts bigwig bam mm10
13 months ago
raquelgarza95 • 40
0
Votes
0
Replies
271
Views
Software Engineer, UCSC Genomics Institute
0 Votes | 0 Replies
engineer ucsc genomics software Job
13 months ago
genomicshr • 10
1
Vote
2
Replies
251
Views
Senior Software Engineer
1 Vote | 2 Replies
software engineer ucsc genomics Job
13 months ago
genomicshr • 10 • updated 13 months ago
RamRS 21k
0
Votes
0
Replies
289
Views
UCSC ISO DevOps Engineer for Computational Genomics Platform!
0 Votes | 0 Replies
engineer ucsc genomics DevOps Job
14 months ago
genomicshr • 10
1
Vote
6
Replies
256
Views
Find the 3' utrs, 5'utrs and their counts from bam files
1 Vote | 6 Replies
bam bed ucsc bedtools utr
14 months ago
ilovesuperheroes1993 • 0 • updated 14 months ago
Gautier Richard • 280
2
Votes
1
Reply
227
Views
bigWigSummary with bed file for a specific amount of datapoints in output
2 Votes | 1 Reply
UCSC bigwig bed summary average mean
14 months ago
newscient • 20 • updated 14 months ago
Devon Ryan 90k
1
Vote
4
Replies
423
Views
Convert MAF to FASTA
1 Vote | 4 Replies
alignment soft ucsc
15 months ago
tim.ivanov.92 • 10 • updated 15 months ago
kloetzl ♦ 1.0k
4
Votes
2
Replies
350
Views
Full genome phyloP scores from UCSC Browser
4 Votes | 2 Replies
ucsc database
15 months ago
cetin.m • 30 • updated 15 months ago
cmdcolin ♦ 1.2k
1
Vote
2
Replies
230
Views
Where should I go to download human SNP reference data ? hg18_unmasked.plusContam.fa
1 Vote | 2 Replies
SNP next-gen UCSC genome
16 months ago
Ashley • 50 • updated 16 months ago
ATpoint 17k
4
Votes
9
Replies
371
Views
MAF format help
4 Votes | 9 Replies
ucsc mafFrags
16 months ago
tim.ivanov.92 • 10
2
Votes
5
Replies
325
Views
Can i use ucsc track browser without a reference organism?
2 Votes | 5 Replies
ucsc aln clustalw annotation
18 months ago
tim.ivanov.92 • 10 • updated 16 months ago
Biostar 20
2
Votes
1
Reply
343
Views
mm10 phyloP download for custom tracks
2 Votes | 1 Reply
phyloP conservation UCSC
17 months ago
rbronste • 240 • updated 16 months ago
Biostar 20
47
Votes
16
Replies
19k
Views
Get rs number based on position
47 Votes | 16 Replies
ucsc mysql snp
8.8 years ago
Zach Stednick • 650 • updated 16 months ago
zx8754 7.5k
64
Votes
12
Replies
26k
Views
How Can I Get The Human Chromosome Centromere Position And Chromosome Length In Grch37/Hg19
64 Votes | 12 Replies
position ucsc
9.6 years ago
Jdk • 220 • updated 17 months ago
Shixiang • 40
1
Vote
2
Replies
374
Views
Reformating bedGraph files in shell script
1 Vote | 2 Replies
bedGraph bigWig ucsc chr awk
18 months ago
m93 • 150 • updated 17 months ago
Biostar 20
0
Votes
0
Replies
320
Views
UCSC Genomics Institute seeking External Collaborations Project Manager!
0 Votes | 0 Replies
project management genomics UCSC collaboration Job
17 months ago
genomicshr • 10
13
Votes
5
Replies
678
Views
How do I get a list of all species with a fasta genome in UCSC?
13 Votes | 5 Replies
UCSC
2.7 years ago
endrebak • 760 • updated 17 months ago
Biostar 20
2
Votes
4
Replies
1.3k
Views
doubts about genome assembly and ensembl
2 Votes | 4 Replies
Assembly SNP Ensembl UCSC Genome Browser
5.2 years ago
palliyath91 • 0 • updated 17 months ago
Biostar 20
5
Votes
6
Replies
8.6k
Views
Where Can I Get Annovar 'Refgene' Format?
5 Votes | 6 Replies
annovar ucsc
8.1 years ago
jessada • 100 • updated 17 months ago
lffu_0032 • 30
0
Votes
8
Replies
338
Views
UCSC itemRgb on column 9
0 Votes | 8 Replies
ucsc itemRgb
18 months ago
varsha619 • 80
0
Votes
6
Replies
1.6k
Views
Duplicate gene symbols converted from UCSC gene id
0 Votes | 6 Replies
RNA-Seq gene expression cufflinks ucsc
4.1 years ago
gndy90 • 0 • updated 18 months ago
RamRS 21k
0
Votes
2
Replies
1.2k
Views
Problem starting and running Gmaj (MAF file viewer and manipulator)
0 Votes | 2 Replies
Gmaj JRE Java MAF UCSC
4.1 years ago
Thomas Bradley • 90 • updated 18 months ago
RamRS 21k
2
Votes
3
Replies
1.6k
Views
How can get MAF for set of SNPs from each population based on 1000 Genome?
2 Votes | 3 Replies
R 1000 Genome hapmap ucsc Ensembl
4.1 years ago
star • 150 • updated 18 months ago
zx8754 7.5k
1
Vote
4
Replies
250
Views
Force Not to Ignore Repeats in UCSC Table Browser
1 Vote | 4 Replies
ucsc
18 months ago
mgru • 10
0
Votes
0
Replies
334
Views
UCSC hub: autoscale option for multiwig track
0 Votes | 0 Replies
ucsc multiWig track autoscale
18 months ago
m93 • 150
3
Votes
2
Replies
335
Views
variableStep vs fixedStep for range formats
3 Votes | 2 Replies
ucsc formats bigwig bedgraph range
18 months ago
m93 • 150 • updated 18 months ago
RamRS 21k
2
Votes
1
Reply
979
Views
Mapability index (track) from UCSC
2 Votes | 1 Reply
UCSC mapability
4.1 years ago
nbhardwaj • 130 • updated 18 months ago
RamRS 21k
1
Vote
3
Replies
573
Views
the expression of miRNA in ucsc genome browser
1 Vote | 3 Replies
gene ucsc expression cancer miRNA
21 months ago
yueli7 • 40 • updated 18 months ago
mary • 20
0
Votes
1
Reply
360
Views
Error displaying GTEX like boxplot in UCSC Genome Browser - "Error creating boxplot from sample data"
0 Votes | 1 Reply
ucsc genomebrowser boxplot GTEx Barcharts
18 months ago
ApoorvaB • 210
5
Votes
8
Replies
566
Views
Output bedGraph from genomeCoverageBed is missing "chr"
5 Votes | 8 Replies
RNA-Seq ucsc genomeCoverageBed bedGraph bigWig
18 months ago
m93 • 150 • updated 18 months ago
RamRS 21k
487 results • Page 1 of 13
Recent Votes
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
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Recent Replies
Comment: This is a test post by Natay Aberra 0
@Natay-Aberra test the mentions still work
Answer: This is a test post by Natay Aberra 0
Add an answer to this
Comment: This is a test post by Natay Aberra 0
Add a comment to this
Comment: Test tweet by genomax 68k
https://twitter.com/EricTopol/status/1241821959584747521?s=09
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights? by mdondrup+1463528 • 30
one more maybe
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights? by Michael 100
and another one....
Comment: How to install CRISPRCasFinder under Ubuntu without having administrator rights? by Michael 100
i am nutz
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights? by Michael 100
bla`enter code here` #!/bin/basj echo # hi
Comment: How to deal with the .sra.vdbcache files after downloading a sra file? by ATpoint 17k
Just delete.
Comment: How to deal with the .sra.vdbcache files after downloading a sra file? by Jon • 10
Did you solve the mystery? I have the same question and I could not find any clear answers...
Comment: Testing recipe link by Istvan Albert 80k
@genomax18713 change your handle to make it simpler
Comment: Testing recipe link by Istvan Albert 80k
let's see if the parenthesis at the end is fixed (https://www.biostars.org) or like this (see https://www.biostars.org)
Comment: Testing by ATpoint 17k
@ATpoint ping
Answer: How do play audio (playsound) in background of Python script? by genomax 68k
https://gist.github.com/afrendeiro/6732a46b949e864d6803
Comment: Testing by RamRS 21k
A `new_biostars` tag, @genomax18713? Seriously?
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