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Showing : RNA-Seq • reset
0
Votes
1
Reply
42
Views
this is a test post
rna-seq merge
11 weeks ago
natay.aberra • 10 • updated 3 days ago
asdasdasd • 0
2
Votes
3
Replies
296
Views
How to deal with the .sra.vdbcache files after downloading a sra file?
RNA-Seq
14 months ago
dz2353 • 80
0
Votes
1
Reply
577
Views
About CIRI's output
rna-seq CIRI splicing splicesites
2.1 years ago
csijst • 20 • updated 3 months ago
Magdalena • 0
9
Votes
10
Replies
388
Views
Hardware requirement for RNA-seq
rna-seq hardware alignment R
15 months ago
Antonio.Aubry • 10
0
Votes
1
Reply
309
Views
New bioinformatics courses at Edinburgh Genomics
RNA-Seq R Workshop Training Linux News
17 months ago
Edinburgh Genomics Training • 30
2
Votes
1
Reply
189
Views
Summer Courses @ Edinburgh Genomics
training courses workshop python RNA-Seq News
13 months ago
Edinburgh Genomics Training • 30
4
Votes
12
Replies
1.2k
Views
Python for bioinformatics
RNA-Seq sequence gene software error
2.7 years ago
MKS • 0
0
Votes
1
Reply
143
Views
DESeq2 results versus by eye comparison in IGV
RNA-Seq IGV DESeq2
12 months ago
kathryn.eckartt • 20 • updated 12 months ago
swbarnes2 5.7k
1
Vote
1
Reply
933
Views
what's wrong with htseq-count codes???
RNA-Seq
3.5 years ago
biologo • 20 • updated 12 months ago
lieven.sterck 5.1k
51
Votes
42
Replies
12k
Views
PCA plot from read count matrix from RNA-Seq
RNA-Seq pca
2.6 years ago
rachel.kubik12 • 80 • updated 12 months ago
mayankkaashyap • 0
0
Votes
0
Replies
148
Views
POST DOC RESEARCH TRAINEE (RI)
R RNA-Seq SNP Job
12 months ago
dalois • 0
0
Votes
1
Reply
156
Views
Get bowtie2 to ignore isoform variants from Trinity assembly?
RNA-Seq
12 months ago
CephBirk • 0 • updated 12 months ago
h.mon 25k
3
Votes
2
Replies
232
Views
How to obtain transcript level TPM using stringtie?
RNA-Seq stringtie
12 months ago
kousi31 • 0 • updated 12 months ago
ruisergioluis • 20
1
Vote
4
Replies
183
Views
interpretation of orthofinder result
RNA-Seq Orthologous OrthoFinder
12 months ago
mxlsherry1992 • 10 • updated 12 months ago
geneticatt • 0
0
Votes
1
Reply
119
Views
WGCNA cannot be done to compare two conditions?
WGCNA RNA-Seq rna-seq
12 months ago
galiciaa • 0 • updated 12 months ago
Ar • 860
0
Votes
1
Reply
115
Views
Difficulty mapping Ribo-seq reads to annotated transcriptome features
Annotation Alignment HTSeq Ribo-Seq RNA-Seq
12 months ago
jpcchoy • 0
0
Votes
0
Replies
137
Views
Visualize gene fusions in IGV
RNA-Seq next-gen
12 months ago
Ron • 950
0
Votes
7
Replies
195
Views
analyze and compare PValues in 2 csv file by python
python csv RNA-Seq
12 months ago
ali.hakimzadeh • 0
0
Votes
0
Replies
84
Views
Kissplice2reftranscriptome error : IndexError
kissplice k2rt SNP RNA-Seq
12 months ago
jfo • 10
4
Votes
4
Replies
143
Views
Any help on how to detect viral transcripts in ONT RNAseq data
ONT RNA-Seq
12 months ago
j.thomas93 • 0 • updated 12 months ago
WouterDeCoster 39k
0
Votes
0
Replies
100
Views
MsiSensor Msi_Germline output
RNA-Seq
12 months ago
mandhirsikander • 0
0
Votes
1
Reply
112
Views
What is acceptable optimal overall percentage of Hisat2?
rna-seq
12 months ago
mathavanbioinfo • 10
1
Vote
8
Replies
2.5k
Views
Downloading SRA data using the SRA Toolkit
RNA-Seq rna-seq sequencing
5.1 years ago
F ♦ 3.4k • updated 12 months ago
Andy.Judell • 0
1
Vote
1
Reply
128
Views
p53 mutations for NCI60 cell lines
RNA-Seq gene
12 months ago
rotemkat • 0 • updated 12 months ago
prabin.dm • 160
0
Votes
7
Replies
213
Views
No aligned reads after featurecounts. BAM files have >85% reads mapped
RNA-Seq
12 months ago
LAB_2019 • 0 • updated 12 months ago
lieven.sterck 5.1k
1
Vote
4
Replies
167
Views
orthoFinder software question
RNA-Seq sequence
12 months ago
mxlsherry1992 • 10 • updated 12 months ago
h.mon 25k
1
Vote
1
Reply
126
Views
How to merge Kallisto TSV files for use with Tximport
RNA-Seq R Kallisto Tximport
12 months ago
RCAider19 • 0
6
Votes
6
Replies
1.1k
Views
Can we concatenate two fastq files from same sample but different runs
sequencing RNA-Seq
2.0 years ago
Payal • 30 • updated 12 months ago
anamaria • 30
1
Vote
5
Replies
242
Views
denovo transcriptome assembly
RNA-Seq Assembly
12 months ago
1234anjalianjali1234 • 30 • updated 12 months ago
kristoffer.vittingseerup ♦ 1.8k
0
Votes
0
Replies
100
Views
Differential gene expression based on other genes
RNA-Seq
12 months ago
jgsponer • 0
1
Vote
3
Replies
179
Views
How to process RMA data of gene microarry ?
RNA-Seq R
12 months ago
Laura_zz • 0 • updated 12 months ago
Kevin Blighe 43k
0
Votes
0
Replies
130
Views
How to quantify mutations by type (e.g. A>T, T>A, G>C, ...) within reads mapping to genes
RNA-Seq
12 months ago
gdeniz • 0
1
Vote
4
Replies
348
Views
NCBI Taxonomy IDs for Kraken-Silva Database
RNA-Seq
17 months ago
josmos43 • 0 • updated 12 months ago
lara.h.urban • 0
0
Votes
0
Replies
96
Views
DESeq multiple comparisons post normalization
RNA-Seq Deseq2 normalization
12 months ago
zapsep • 0
0
Votes
0
Replies
318
Views
Certified Genetic Counselor [Full-Time]
Genetic Counselor genome RNA-Seq next-gen Job
12 months ago
RegenerationCenter • 0
4
Votes
6
Replies
624
Views
Splice junction sites and number of splitted reads from STAR aligned bam
RNA-Seq sashimi plot splice junctions
2.0 years ago
filippo.martignano • 10 • updated 12 months ago
phaedragius • 0
2
Votes
3
Replies
146
Views
Usage of Mutect2
gatk mutect2 SNP next-gen RNA-Seq
12 months ago
gprashant123 • 0 • updated 12 months ago
MatthewP • 110
2
Votes
4
Replies
167
Views
retrieving survival informations from cBioportal using Rstudio
RNA-Seq R gene survival
12 months ago
ghadou.ouss • 0
1
Vote
6
Replies
249
Views
Why does Rsubread featureCounts with Ensemble GRCm38.96.GTF picks ensembl_exon_id, instead of gene_id
RNA-Seq R assembly gene
12 months ago
akh22 • 20
3
Votes
3
Replies
224
Views
how to normalize row counts before drawing heatmap?
R RNA-Seq heatmap
12 months ago
smyiz • 0
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