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Showing : RNA-Seq • reset
4
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12
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1.0k
Views
7 follow
Python for bioinformatics
24 months ago MKS • 0 • updated 10 weeks ago pradnya.bamane23 • 0
0
Votes
1
Reply
59
Views
see reads in .bam file, no counts after HTseq
4 months ago emilybowie2 • 0
0
Votes
1
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66
Views
DESeq2 results versus by eye comparison in IGV
4 months ago kathryn.eckartt • 20 • updated 4 months ago swbarnes2 5.7k
0
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0
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73
Views
Job: London LIDo PhD studentship
4 months ago dxia • 0
1
Vote
1
Reply
869
Views
what's wrong with htseq-count codes???
2.8 years ago biologo • 20 • updated 4 months ago lieven.sterck 5.1k
51
Votes
42
Replies
12k
Views
11 follow
PCA plot from read count matrix from RNA-Seq
23 months ago rachel.kubik12 • 80 • updated 4 months ago mayankkaashyap • 0
0
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0
Replies
80
Views
Job: POST DOC RESEARCH TRAINEE (RI)
4 months ago dalois • 0
0
Votes
1
Reply
83
Views
Get bowtie2 to ignore isoform variants from Trinity assembly?
4 months ago CephBirk • 0 • updated 4 months ago h.mon 25k
3
Votes
2
Replies
153
Views
How to obtain transcript level TPM using stringtie?
4 months ago kousi31 • 0 • updated 4 months ago ruisergioluis • 20
1
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4
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105
Views
interpretation of orthofinder result
4 months ago mxlsherry1992 • 10 • updated 4 months ago geneticatt • 0
0
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1
Reply
68
Views
WGCNA cannot be done to compare two conditions?
4 months ago galiciaa • 0 • updated 4 months ago Ar • 860
0
Votes
1
Reply
61
Views
Difficulty mapping Ribo-seq reads to annotated transcriptome features
4 months ago jpcchoy • 0
0
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0
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83
Views
Visualize gene fusions in IGV
4 months ago Ron • 950
0
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7
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83
Views
analyze and compare PValues in 2 csv file by python
4 months ago ali.hakimzadeh • 0
0
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0
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49
Views
Kissplice2reftranscriptome error : IndexError
4 months ago jfo • 10
4
Votes
4
Replies
82
Views
Any help on how to detect viral transcripts in ONT RNAseq data
4 months ago j.thomas93 • 0 • updated 4 months ago WouterDeCoster 39k
0
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0
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51
Views
MsiSensor Msi_Germline output
4 months ago mandhirsikander • 0
0
Votes
1
Reply
65
Views
What is acceptable optimal overall percentage of Hisat2?
4 months ago mathavanbioinfo • 10
1
Vote
8
Replies
2.5k
Views
Downloading SRA data using the SRA Toolkit
4.4 years ago F ♦ 3.4k • updated 4 months ago Andy.Judell • 0
1
Vote
1
Reply
84
Views
p53 mutations for NCI60 cell lines
4 months ago rotemkat • 0 • updated 4 months ago prabin.dm • 160
0
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7
Replies
124
Views
No aligned reads after featurecounts. BAM files have >85% reads mapped
4 months ago LAB_2019 • 0 • updated 4 months ago lieven.sterck 5.1k
1
Vote
4
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85
Views
orthoFinder software question
4 months ago mxlsherry1992 • 10 • updated 4 months ago h.mon 25k
1
Vote
1
Reply
70
Views
How to merge Kallisto TSV files for use with Tximport
4 months ago RCAider19 • 0
6
Votes
6
Replies
1.0k
Views
6 follow
Can we concatenate two fastq files from same sample but different runs
16 months ago Payal • 30 • updated 4 months ago anamaria • 30
1
Vote
5
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164
Views
denovo transcriptome assembly
4 months ago 1234anjalianjali1234 • 30 • updated 4 months ago kristoffer.vittingseerup ♦ 1.8k
0
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0
Replies
62
Views
Differential gene expression based on other genes
4 months ago jgsponer • 0
1
Vote
3
Replies
124
Views
How to process RMA data of gene microarry ?
4 months ago Laura_zz • 0 • updated 4 months ago Kevin Blighe 43k
0
Votes
0
Replies
74
Views
How to quantify mutations by type (e.g. A>T, T>A, G>C, ...) within reads mapping to genes
4 months ago gdeniz • 0
1
Vote
4
Replies
284
Views
NCBI Taxonomy IDs for Kraken-Silva Database
8 months ago josmos43 • 0 • updated 4 months ago lara.h.urban • 0
0
Votes
0
Replies
56
Views
DESeq multiple comparisons post normalization
4 months ago zapsep • 0
0
Votes
0
Replies
228
Views
Job: Certified Genetic Counselor [Full-Time]
4 months ago RegenerationCenter • 0
4
Votes
6
Replies
565
Views
Splice junction sites and number of splitted reads from STAR aligned bam
16 months ago filippo.martignano • 10 • updated 4 months ago phaedragius • 0
2
Votes
3
Replies
86
Views
Usage of Mutect2
4 months ago gprashant123 • 0 • updated 4 months ago MatthewP • 110
2
Votes
4
Replies
104
Views
retrieving survival informations from cBioportal using Rstudio
4 months ago ghadou.ouss • 0
1
Vote
6
Replies
142
Views
Why does Rsubread featureCounts with Ensemble GRCm38.96.GTF picks ensembl_exon_id, instead of gene_id
4 months ago akh22 • 20
3
Votes
3
Replies
171
Views
how to normalize row counts before drawing heatmap?
4 months ago smyiz • 0
0
Votes
5
Replies
115
Views
normalization with RPKM
4 months ago frida • 10 • updated 4 months ago darbinator • 180
0
Votes
1
Reply
135
Views
Human papillomavirus HPV annotation file (.gtf)
4 months ago yasmeen.abououf • 0 • updated 4 months ago h.mon 25k
2
Votes
6
Replies
180
Views
htseq-count: error: the following arguments are required: featuresfilename
5 months ago sarfrajiiet • 0 • updated 4 months ago h.mon 25k
0
Votes
2
Replies
130
Views
rna paired sequence sort is important
5 months ago sarfrajiiet • 0 • updated 4 months ago WouterDeCoster 39k
12,027 results • Page 1 of 301
Recent Votes
Markdown
Comment: Markdown
New test post with the AJAX system
Answer: Markdown
Markdown
A: Which Are The Best Programming Languages For A Bioinformatician?
A: Which Are The Best Programming Languages For A Bioinformatician?
Answer: Which Are The Best Programming Languages For A Bioinformatician?
how do I run this recipe
C: How to apply vcftools --diff to identify vcf-specific variants/records
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Autobiographer to lilyjacob987 • 0
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Recent Replies
Comment: " testing dfg " by RamRS 21k
Testing highlighting functionality. Using `<span style="background-color: #FFFF00">`: <span style="background-color: #FFFF00">Span trial</…
Comment: " testing dfg " by RamRS 21k
Testing <u>underline</u> functionality.
Answer: Which Are The Best Programming Languages For A Bioinformatician? by Anna • 0
I could recommend you this research - https://www.romexsoft.com/blog/aws-hipaa-compliance-best-practices-checklist/
Comment: " testing dfg " by RamRS 21k
Testing comment with parentheses in URL: (this URL: https://www.ncbi.nlm.nih.gov/search/all/?term=BRCA1%20AND%20(Human%20OR%20Mouse))
Comment: get gene biotype for hg38 refseq by Natay Aberra 0
test the bumping
Comment: get gene biotype for hg38 refseq by genomax 68k
http://test.biostars.org/accounts/profile/2/ http://test.biostars.org/p/34/
Comment: New test post with the AJAX system by Natay Aberra 0
Yeah we will probably end up doing that.
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/accounts/profile/18713/ http://test.biostars.org/p/p371267/#p371295 test the bumping
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/p/p371285/ http://test.biostars.org/accounts/profile/user-2/
Comment: New test post with the AJAX system by genomax 68k
Checking to see if this comment bumps the thread to top.
Comment: Markdown by genomax 68k
http://test.biostars.org/p/p371285/
Comment: Markdown by genomax 68k
@nba5048: Why is the original post showing up in separate sections? No way to use old style reference to users: http://test.biostars.org/a…
Comment: Markdown by Natay Aberra 0
Check your biostar messages, You did get a notification.
Comment: Markdown by ATpoint 17k
Test image: ![enter image description here][1] [1]: http://oi66.tinypic.com/33kdnjt.jpg
Comment: Markdown by ATpoint 17k
Nope, no notification.
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