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Showing : PCA • reset
51
Votes
42
Replies
12k
Views
11 follow
PCA plot from read count matrix from RNA-Seq
2.0 years ago rachel.kubik12 • 80 • updated 5 months ago mayankkaashyap • 0
10
Votes
2
Replies
2.2k
Views
PCA using HapMap population data
3.6 years ago eze.anokian • 10 • updated 5 months ago zx8754 7.5k
20
Votes
8
Replies
239
Views
Why do PCA+tSNE/viSNE or PCA+UMAP, and not just tSNE/viSNE or UMAP on their own?
5 months ago Kevin Blighe 43k • updated 5 months ago chris86 • 290
1
Vote
4
Replies
117
Views
How to in R: Include principal components as covariates in analysis
6 months ago RNAseqer • 110 • updated 6 months ago Kevin Blighe 43k
1
Vote
6
Replies
158
Views
How to create a PCA Plot of Proteomics Data in R?
6 months ago ishackm • 60
2
Votes
1
Reply
131
Views
Principal components analysis of SNP data
6 months ago Abdul Rafay Khan • 1000
7
Votes
11
Replies
253
Views
PCA analysis with R
6 months ago manjumoorthy95 • 10 • updated 6 months ago Kevin Blighe 43k
11
Votes
2
Replies
1.8k
Views
How Pca Was Done To Relate Health Status And Abundance Of Bacteria?
8.3 years ago Tianyang Li • 490 • updated 6 months ago Biostar 20
2
Votes
6
Replies
205
Views
Different mappings, different PCAs using TEtranscripts
7 months ago raquelgarza95 • 40
1
Vote
1
Reply
978
Views
What is the use of PCA in ethnicity correction
3.7 years ago MAPK ♦ 1.4k • updated 7 months ago Biostar 20
0
Votes
0
Replies
123
Views
Where to get population diversity information of GTEx database?
7 months ago r.tor • 40
7
Votes
6
Replies
2.9k
Views
EIGENSOFT : Ploteig, 3D Plots
4.4 years ago aritra90 • 40 • updated 7 months ago ravikumardhanapal • 0
2
Votes
3
Replies
222
Views
How to check if first two components of PCA are separated without visualisation?
7 months ago fernardo • 130 • updated 7 months ago raunakms ♦ 1.1k
10
Votes
16
Replies
263
Views
Post PCA analysis
8 months ago charvinangia • 30 • updated 8 months ago Kevin Blighe 43k
3
Votes
11
Replies
257
Views
Can this PCA be a highly good result?
8 months ago fernardo • 130
10
Votes
8
Replies
3.1k
Views
7 follow
input counts to PCA in RNAseq
2.2 years ago elizabethR • 70 • updated 8 months ago Kevin Blighe 43k
0
Votes
0
Replies
162
Views
Reference set of SNPs for SNP-pruning for PCA in GWAS
8 months ago pcsk9 • 0
0
Votes
1
Reply
180
Views
pcaMethods: What is best suited for analysing log2cpm data?
8 months ago augihol • 20 • updated 8 months ago Kevin Blighe 43k
5
Votes
4
Replies
192
Views
A weird PCA result using a local Galaxy
8 months ago Gary • 450 • updated 8 months ago Devon Ryan 90k
3
Votes
1
Reply
335
Views
Principal component analysis: PC2 contribute more to variance than PC1?
9 months ago chilifan • 70 • updated 9 months ago manuel.belmadani • 830
17
Votes
9
Replies
494
Views
Tool: PCAtools: everything Principal Components Analysis
9 months ago Kevin Blighe 43k • updated 9 months ago prasundutta87 • 330
3
Votes
2
Replies
251
Views
sva combat removes wanted biological variation
9 months ago exin • 50 • updated 9 months ago zx8754 7.5k
23
Votes
11
Replies
3.3k
Views
Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
9 months ago Kevin Blighe 43k
6
Votes
5
Replies
4.2k
Views
Question About Hellinger Distances And Principle Coordinates Analysis
5.9 years ago bioinformaticshelp • 10 • updated 9 months ago Biostar 20
2
Votes
2
Replies
425
Views
R RGL plot3d different symbols
11 months ago dp0b • 30 • updated 10 months ago Alex Reynolds 28k
2
Votes
15
Replies
302
Views
to get each covariate with PC loading in PCA
10 months ago Grace_G • 20
53
Votes
42
Replies
7.8k
Views
10 follow
Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format (old)
2.2 years ago Kevin Blighe 43k • updated 10 months ago alicodendrochit • 0
0
Votes
1
Reply
264
Views
How to choose best PCA for reducing genomic inflation
10 months ago BioRyder • 160 • updated 10 months ago Kevin Blighe 43k
29
Votes
30
Replies
3.2k
Views
6 follow
Tool: BioVinci: user-friendly software to make plotting easy - PCA, 3D scatter plot, venn diagram, you name it.
10 months ago Jennifer Pham • 290
1
Vote
5
Replies
371
Views
how to plot PCA for microarray normalized data
11 months ago raya.girish • 20 • updated 11 months ago Benn 6.9k
1
Vote
1
Reply
229
Views
Whether to include reference genome in PCA for association analysis?
11 months ago Phoenix Mu • 0 • updated 11 months ago zx8754 7.5k
38
Votes
9
Replies
5.0k
Views
7 follow
why PCA for RNA-Seq but tSNE for scRNA-seq?
18 months ago CY • 340 • updated 11 months ago Minstein • 100
79
Votes
27
Replies
9.1k
Views
9 follow
PCA in a RNA seq analysis
2.0 years ago Mozart • 130 • updated 11 months ago Giovanni M Dall'Olio 26k
1
Vote
5
Replies
889
Views
How to do feature selection using PCA?
12 months ago ahmad mousavi • 430
6
Votes
2
Replies
751
Views
How to perform PCA on gene expression?
12 months ago Thomas B. • 10 • updated 12 months ago ahmad mousavi • 430
0
Votes
2
Replies
233
Views
Getting loadings of components from pcaMethods
12 months ago johnnytam100 • 100 • updated 12 months ago Philipp Bayer 6.1k
0
Votes
1
Reply
473
Views
Question about PCA plot using RPKM/FPKM.
13 months ago hxlei613 • 80 • updated 13 months ago Kevin Blighe 43k
0
Votes
0
Replies
216
Views
Mitochondrial genomic analysis by PCoA, PCA and Arlequin
13 months ago micro32uvas • 10
0
Votes
3
Replies
1.3k
Views
adding PCA ellipses on ggplot2
13 months ago demoraesdiogo2017 • 10
3
Votes
7
Replies
808
Views
How to create PCA plot and heatmaps using only significant genes in edgeR ?
16 months ago Björn • 40 • updated 14 months ago zx8754 7.5k
190 results • Page 1 of 5
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New test post with the AJAX system
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A: Which Are The Best Programming Languages For A Bioinformatician?
A: Which Are The Best Programming Languages For A Bioinformatician?
Answer: Which Are The Best Programming Languages For A Bioinformatician?
how do I run this recipe
C: How to apply vcftools --diff to identify vcf-specific variants/records
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Comment: Which Are The Best Programming Languages For A Bioinformatician? by Digital • 0
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Comment: " testing dfg " by RamRS 21k
Testing highlighting functionality. Using `<span style="background-color: #FFFF00">`: <span style="background-color: #FFFF00">Span trial</…
Comment: " testing dfg " by RamRS 21k
Testing <u>underline</u> functionality.
Answer: Which Are The Best Programming Languages For A Bioinformatician? by Anna • 0
I could recommend you this research - https://www.romexsoft.com/blog/aws-hipaa-compliance-best-practices-checklist/
Comment: " testing dfg " by RamRS 21k
Testing comment with parentheses in URL: (this URL: https://www.ncbi.nlm.nih.gov/search/all/?term=BRCA1%20AND%20(Human%20OR%20Mouse))
Comment: get gene biotype for hg38 refseq by Natay Aberra 0
test the bumping
Comment: get gene biotype for hg38 refseq by genomax 68k
http://test.biostars.org/accounts/profile/2/ http://test.biostars.org/p/34/
Comment: New test post with the AJAX system by Natay Aberra 0
Yeah we will probably end up doing that.
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/accounts/profile/18713/ http://test.biostars.org/p/p371267/#p371295 test the bumping
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/p/p371285/ http://test.biostars.org/accounts/profile/user-2/
Comment: New test post with the AJAX system by genomax 68k
Checking to see if this comment bumps the thread to top.
Comment: Markdown by genomax 68k
http://test.biostars.org/p/p371285/
Comment: Markdown by genomax 68k
@nba5048: Why is the original post showing up in separate sections? No way to use old style reference to users: http://test.biostars.org/a…
Comment: Markdown by Natay Aberra 0
Check your biostar messages, You did get a notification.
Comment: Markdown by ATpoint 17k
Test image: ![enter image description here][1] [1]: http://oi66.tinypic.com/33kdnjt.jpg
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