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Showing : PCA • reset
51
Votes
42
Replies
12k
Views
11 follow
PCA plot from read count matrix from RNA-Seq
2.1 years ago rachel.kubik12 • 80 • updated 6 months ago mayankkaashyap • 0
10
Votes
2
Replies
2.2k
Views
PCA using HapMap population data
3.7 years ago eze.anokian • 10 • updated 6 months ago zx8754 7.5k
20
Votes
8
Replies
248
Views
Why do PCA+tSNE/viSNE or PCA+UMAP, and not just tSNE/viSNE or UMAP on their own?
6 months ago Kevin Blighe 43k • updated 6 months ago chris86 • 290
1
Vote
4
Replies
123
Views
How to in R: Include principal components as covariates in analysis
7 months ago RNAseqer • 110 • updated 7 months ago Kevin Blighe 43k
1
Vote
6
Replies
161
Views
How to create a PCA Plot of Proteomics Data in R?
7 months ago ishackm • 60
2
Votes
1
Reply
134
Views
Principal components analysis of SNP data
7 months ago Abdul Rafay Khan • 1000
7
Votes
11
Replies
262
Views
PCA analysis with R
7 months ago manjumoorthy95 • 10 • updated 7 months ago Kevin Blighe 43k
11
Votes
2
Replies
1.8k
Views
How Pca Was Done To Relate Health Status And Abundance Of Bacteria?
8.3 years ago Tianyang Li • 490 • updated 7 months ago Biostar 20
2
Votes
6
Replies
213
Views
Different mappings, different PCAs using TEtranscripts
7 months ago raquelgarza95 • 40
1
Vote
1
Reply
982
Views
What is the use of PCA in ethnicity correction
3.8 years ago MAPK ♦ 1.4k • updated 8 months ago Biostar 20
0
Votes
0
Replies
129
Views
Where to get population diversity information of GTEx database?
8 months ago r.tor • 40
7
Votes
6
Replies
2.9k
Views
EIGENSOFT : Ploteig, 3D Plots
4.5 years ago aritra90 • 40 • updated 8 months ago ravikumardhanapal • 0
2
Votes
3
Replies
228
Views
How to check if first two components of PCA are separated without visualisation?
8 months ago fernardo • 130 • updated 8 months ago raunakms ♦ 1.1k
10
Votes
16
Replies
266
Views
Post PCA analysis
9 months ago charvinangia • 30 • updated 9 months ago Kevin Blighe 43k
3
Votes
11
Replies
267
Views
Can this PCA be a highly good result?
9 months ago fernardo • 130
10
Votes
8
Replies
3.1k
Views
7 follow
input counts to PCA in RNAseq
2.2 years ago elizabethR • 70 • updated 9 months ago Kevin Blighe 43k
0
Votes
0
Replies
164
Views
Reference set of SNPs for SNP-pruning for PCA in GWAS
9 months ago pcsk9 • 0
0
Votes
1
Reply
182
Views
pcaMethods: What is best suited for analysing log2cpm data?
9 months ago augihol • 20 • updated 9 months ago Kevin Blighe 43k
5
Votes
4
Replies
196
Views
A weird PCA result using a local Galaxy
9 months ago Gary • 450 • updated 9 months ago Devon Ryan 90k
3
Votes
1
Reply
336
Views
Principal component analysis: PC2 contribute more to variance than PC1?
10 months ago chilifan • 70 • updated 9 months ago manuel.belmadani • 830
17
Votes
9
Replies
498
Views
Tool: PCAtools: everything Principal Components Analysis
10 months ago Kevin Blighe 43k • updated 10 months ago prasundutta87 • 330
3
Votes
2
Replies
254
Views
sva combat removes wanted biological variation
10 months ago exin • 50 • updated 10 months ago zx8754 7.5k
23
Votes
11
Replies
3.3k
Views
Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
10 months ago Kevin Blighe 43k
6
Votes
5
Replies
4.2k
Views
Question About Hellinger Distances And Principle Coordinates Analysis
6.0 years ago bioinformaticshelp • 10 • updated 10 months ago Biostar 20
2
Votes
2
Replies
428
Views
R RGL plot3d different symbols
12 months ago dp0b • 30 • updated 11 months ago Alex Reynolds 28k
2
Votes
15
Replies
314
Views
to get each covariate with PC loading in PCA
11 months ago Grace_G • 20
53
Votes
42
Replies
7.9k
Views
10 follow
Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format (old)
2.3 years ago Kevin Blighe 43k • updated 11 months ago alicodendrochit • 0
0
Votes
1
Reply
269
Views
How to choose best PCA for reducing genomic inflation
11 months ago BioRyder • 160 • updated 11 months ago Kevin Blighe 43k
29
Votes
30
Replies
3.2k
Views
6 follow
Tool: BioVinci: user-friendly software to make plotting easy - PCA, 3D scatter plot, venn diagram, you name it.
11 months ago Jennifer Pham • 290
1
Vote
5
Replies
378
Views
how to plot PCA for microarray normalized data
12 months ago raya.girish • 20 • updated 12 months ago Benn 6.9k
1
Vote
1
Reply
233
Views
Whether to include reference genome in PCA for association analysis?
12 months ago Phoenix Mu • 0 • updated 12 months ago zx8754 7.5k
38
Votes
9
Replies
5.0k
Views
7 follow
why PCA for RNA-Seq but tSNE for scRNA-seq?
19 months ago CY • 340 • updated 12 months ago Minstein • 100
79
Votes
27
Replies
9.1k
Views
9 follow
PCA in a RNA seq analysis
2.1 years ago Mozart • 130 • updated 12 months ago Giovanni M Dall'Olio 26k
1
Vote
5
Replies
893
Views
How to do feature selection using PCA?
13 months ago ahmad mousavi • 430
6
Votes
2
Replies
753
Views
How to perform PCA on gene expression?
13 months ago Thomas B. • 10 • updated 13 months ago ahmad mousavi • 430
0
Votes
2
Replies
234
Views
Getting loadings of components from pcaMethods
13 months ago johnnytam100 • 100 • updated 13 months ago Philipp Bayer 6.1k
0
Votes
1
Reply
480
Views
Question about PCA plot using RPKM/FPKM.
14 months ago hxlei613 • 80 • updated 14 months ago Kevin Blighe 43k
0
Votes
0
Replies
220
Views
Mitochondrial genomic analysis by PCoA, PCA and Arlequin
14 months ago micro32uvas • 10
0
Votes
3
Replies
1.3k
Views
adding PCA ellipses on ggplot2
14 months ago demoraesdiogo2017 • 10
3
Votes
7
Replies
814
Views
How to create PCA plot and heatmaps using only significant genes in edgeR ?
17 months ago Björn • 40 • updated 15 months ago zx8754 7.5k
190 results • Page 1 of 5
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Answer: test question 1
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A: Which Are The Best Programming Languages For A Bioinformatician?
Answer: Which Are The Best Programming Languages For A Bioinformatician?
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Comment: " testing dfg " by Natay Aberra 0
Thanks a lot!
Comment: " testing dfg " by RamRS 21k
Drag and drop is frigging ***AWESOME***
Answer: " testing dfg " by Natay Aberra 0
Hello, test drag and drop of comments
Comment: " testing dfg " by RamRS 21k
Testing twitter embedding: https://www.twitter.com/statnews/status/656174802911129600 https://twitter.com/statnews/status/660506539762057…
Answer: test question 1 by Linda • 20
more than 10 characters
Comment: Which Are The Best Programming Languages For A Bioinformatician? by Digital • 0
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Comment: " testing dfg " by RamRS 21k
Testing highlighting functionality. Using `<span style="background-color: #FFFF00">`: <span style="background-color: #FFFF00">Span trial</…
Comment: " testing dfg " by RamRS 21k
Testing <u>underline</u> functionality.
Comment: " testing dfg " by RamRS 21k
Testing comment with parentheses in URL: (this URL: https://www.ncbi.nlm.nih.gov/search/all/?term=BRCA1%20AND%20(Human%20OR%20Mouse))
Comment: get gene biotype for hg38 refseq by Natay Aberra 0
test the bumping
Comment: get gene biotype for hg38 refseq by genomax 68k
http://test.biostars.org/accounts/profile/2/ http://test.biostars.org/p/34/
Comment: New test post with the AJAX system by Natay Aberra 0
Yeah we will probably end up doing that.
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/accounts/profile/18713/ http://test.biostars.org/p/p371267/#p371295 test the bumping
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Comment: New test post with the AJAX system by genomax 68k
Checking to see if this comment bumps the thread to top.
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