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97 results • Page
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Showing :
MATRIX
•
reset
11
Votes
2
Replies
25k
Views
R - Append Item Iteratively To Matrix?
r
matrix
10.2 years ago
Darren J. Fitzpatrick
♦ 1.1k
• updated 20 months ago
RamRS
21k
0
Votes
5
Replies
237
Views
How to call a R variable in a loop with Slurm?
r
slurm
matrix
20 months ago
vincentpailler
• 50
9
Votes
10
Replies
6.2k
Views
Memory-Efficient Way To Transpose Csv/Text File?
matrix
scripting
7.2 years ago
Click downvote
• 670
• updated 20 months ago
Biostar
20
0
Votes
1
Reply
177
Views
How to make combinations of genotypes given an allele dataframe?
python
pandas
matrix
dataframe
21 months ago
kristopherfernandez
• 10
3
Votes
8
Replies
288
Views
Error in read.table(file = file, header = header, sep = sep, quote = quote, : duplicate 'row.names' are not allowed
R
r
rstudio
csv
matrix
21 months ago
xxxxxxxx
• 0
• updated 21 months ago
swbarnes2
5.7k
1
Vote
18
Replies
361
Views
6 follow
Distribute proportionality calculations on many nodes (SLURM)
correlation
matrix
slurm
parallelization
21 months ago
vincentpailler
• 50
• updated 21 months ago
Jean-Karim Heriche
19k
0
Votes
1
Reply
127
Views
R - snpmatrix - data filtering
SNP
matrix
22 months ago
Bioinformatics_NewComer
• 320
0
Votes
21
Replies
365
Views
Compute the correlations between submatrices
correlation
R
matrix
foreach
22 months ago
vincentpailler
• 50
• updated 22 months ago
RamRS
21k
0
Votes
0
Replies
153
Views
Split a matrix into submatrices
matrix
correlat
22 months ago
vincentpailler
• 50
0
Votes
0
Replies
208
Views
What kind of protein matrix substitution use for blastX divergent sequences
blast
diamond
homology
matrix
23 months ago
Darill
• 30
1
Vote
3
Replies
1.4k
Views
Distance Matrix For Metagenomes
matrix
7.0 years ago
blanca
• 10
• updated 2.2 years ago
Biostar
20
2
Votes
8
Replies
1.5k
Views
Make matrix of protein pairwise identities/similarities from multiple protein sequences
pairwise
protein
identity
similarity
matrix
2.2 years ago
al-ash
• 100
4
Votes
3
Replies
541
Views
NMF not working for identifying mutational signature
NMF
mutational signature
ranking
SNP
matrix
2.3 years ago
dodausp
• 110
1
Vote
2
Replies
1.3k
Views
Error with combining samples into matrix using abundance_estimates_to_matrix.pl
edger
RNA-Seq
rna-seq
matrix
DE
4.9 years ago
nikelle.petrillo
• 100
• updated 2.3 years ago
RamRS
21k
0
Votes
0
Replies
761
Views
How to calculate a PSSM(Position Specific Scoring matrix) of a protein sequence
Protein
Matrix
2.4 years ago
nkhan.mscs15seecs
• 40
11
Votes
5
Replies
3.3k
Views
How To Get Snps Matrix For Population Genetic Ananlysis From Snps Variant Files
snp
matrix
population
genetics
10.1 years ago
Jianfengmao
• 310
• updated 2.4 years ago
RamRS
21k
18
Votes
24
Replies
1.2k
Views
How to plot a matrix with numbers in the matrix colored using ggplot2 or other ways in R?
SNP
ggplot2
vcf
matrix
R
2.5 years ago
DanielC
• 80
2
Votes
3
Replies
464
Views
Circlize package ?
Circlize
Chord
Diagram
Matrix
R
2.5 years ago
pritampkp15
• 0
• updated 2.5 years ago
zx8754
7.5k
1
Vote
2
Replies
419
Views
Software to group full length 16S rRNA sequences based on identity threshold
rRNA
16S
identity
matrix
species
2.6 years ago
fhsantanna
• 440
• updated 2.5 years ago
Carambakaracho
♦ 1.2k
3
Votes
2
Replies
353
Views
Normalised counts of control samples in gene expression matrix
RNA-Seq
expression matrix
network
R
matrix
2.6 years ago
Pranavathiyani G
• 230
• updated 2.6 years ago
Devon Ryan
90k
1
Vote
4
Replies
1.1k
Views
bwtool matrix error - invalid signed integer
bwtool
matrix
software error
4.0 years ago
rbronste
• 240
• updated 2.7 years ago
Biostar
20
1
Vote
1
Reply
565
Views
DNA Methylation Analysis
DNA Methylation
NGS
R
Python
Matrix
2.9 years ago
caspase8mach
• 0
0
Votes
9
Replies
471
Views
how to separate/split numbers
R
MATRIX
COLUMNS
NUMBER
2.9 years ago
Kian
• 40
• updated 2.9 years ago
st.ph.n
♦ 2.5k
2
Votes
6
Replies
636
Views
Display common genes in sets by a binary matrix
r
matrix
2.9 years ago
lessismore
• 630
• updated 2.9 years ago
russhh
♦ 4.4k
0
Votes
1
Reply
1.1k
Views
Score matrix including pairwise distances from 3 groups: find out whether differences are significant
statistics
scoring
matrix
test
significance
4.7 years ago
Tim
• 0
• updated 3.0 years ago
Biostar
20
0
Votes
5
Replies
1.2k
Views
Problem with Trinity's abundance_estimates_to_matrix.pl
Trinity
RNA-Seq
RSEM
Matrix
3.0 years ago
ando.kelli
• 40
1
Vote
5
Replies
343
Views
Break the repeated col. values into same col vertically displaying the output in R
R
vcf
dataframe
matrix
3.0 years ago
sofie_carolina
• 20
• updated 3.0 years ago
Devon Ryan
90k
4
Votes
3
Replies
540
Views
Filling expr matrix for igraph
R
igraph
matrix
3.2 years ago
Spacebio
• 180
• updated 3.2 years ago
Michael Dondrup
46k
2
Votes
5
Replies
2.2k
Views
ld matrix in plink
matrix
ld
3.4 years ago
janhuang.cn
• 150
• updated 3.3 years ago
DataFanatic
• 130
16
Votes
12
Replies
914
Views
Compare two matrix
Perl
Matrix
3.6 years ago
Amy
• 0
• updated 3.6 years ago
Paul
♦ 1.3k
0
Votes
3
Replies
818
Views
How to fill in missing fields on a VCF to convert into a genotype matrix?
vcf
genotype
matrix
bcf
snps
3.6 years ago
jespinoz
• 20
3
Votes
4
Replies
607
Views
How to calculate log scores from an alignment?
log
scores
matrix
alignment
3.8 years ago
jordidebruin
• 0
• updated 3.8 years ago
a.zielezinski
8.6k
0
Votes
1
Reply
663
Views
Calculating LD between specific alleles even if they are not the minor alleles
linkage disequilibrium
matrix
calculation
3.8 years ago
Vincent Laufer
♦ 1.0k
1
Vote
3
Replies
1.1k
Views
How to create an AffyBatch object using a data matrix?
affy
affyBatch
matrix
3.8 years ago
komal.rathi
♦ 3.4k
2
Votes
3
Replies
1.4k
Views
How to turn a FPKM table in a matrix that can be analyzed in R?
FPKM
R
matrix
DEseq
RNA-Seq
3.9 years ago
JimiOli
• 0
• updated 3.8 years ago
Carlo Yague
♦ 4.5k
0
Votes
1
Reply
794
Views
compare rows of colData and count Matrix
dexseq
deseq
matrix
4.0 years ago
Assa Yeroslaviz
♦ 1.2k
0
Votes
1
Reply
910
Views
How to transform rectangular matrix in Newick tree with java
java
matrix
programming
4.3 years ago
Roxane Boyer
• 950
0
Votes
2
Replies
1.5k
Views
BLOSUM scores compared to PAM scores
BLOSUM
PAM
Matrix
Scores
4.4 years ago
Mathis
• 0
• updated 4.4 years ago
natasha.sernova
♦ 3.5k
0
Votes
0
Replies
814
Views
comparing log2 of allelic-imbalance (converted to Z-score) of different cancer types
RNA-Seq
Z-score
matrix
matlab
ASE
4.4 years ago
Mike Vermeulen
• 0
2
Votes
8
Replies
1.8k
Views
Software for plotting gene presence absence matrix
R
Python
accessory genes
matrix
4.5 years ago
natasha
• 100
• updated 4.5 years ago
Philipp Bayer
6.1k
15
Votes
30
Replies
1.7k
Views
how to retrieve specific raws from a data matrix based on Affymetrix ID in Linux
linux
matrix
affymetrix
4.5 years ago
Mo
• 880
15
Votes
9
Replies
4.4k
Views
Looking For Information On Hi-C (Chromosome Conformation Capture) Analysis: Workflows, Best Practices
matrix
8.0 years ago
cheater149
• 60
• updated 4.9 years ago
Anton Goloborodko
• 250
0
Votes
4
Replies
2.8k
Views
heatmap for a predetermined order of rows
ordered
matrix
5.0 years ago
kanwarjag
• 960
• updated 5.0 years ago
dally
• 180
0
Votes
1
Reply
2.6k
Views
Newick To Distance Matrix
newick
tree
distance
matrix
6.8 years ago
Haluk
• 170
• updated 5.1 years ago
Biostar
20
1
Vote
2
Replies
2.3k
Views
Calculating weights for a Cluster matrix
matrix
R
5.4 years ago
pbio
• 120
• updated 5.1 years ago
informatics bot
• 570
1
Vote
5
Replies
767
Views
Extracting sequences from frequency matrix
sequence
motif
matrix
5.2 years ago
giroudpaul
• 50
• updated 5.2 years ago
Jimbou
• 690
0
Votes
3
Replies
1.2k
Views
MG-RAST API - Problem with space characters in gene names at URL
myposts
mg-rast
API
matrix
abundance
5.2 years ago
fibar
• 50
6
Votes
2
Replies
7.6k
Views
Position Weight Matrix in R or Python
PWM
Peptide
Matrix
6.5 years ago
esantosh10
• 30
• updated 5.3 years ago
kamil_cygan
• 20
3
Votes
3
Replies
3.5k
Views
Quantile normalization in huge matrices
r
matrix
big-data
5.3 years ago
yogacacarolom
• 60
2
Votes
5
Replies
1.7k
Views
Binding several large matrices by column
R
matrix
big-data
5.3 years ago
yogacacarolom
• 60
• updated 5.3 years ago
Pierre Lindenbaum
120k
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