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Showing : plinkreset
How do I remove duplicated by position SNPs using PLink?
10 Votes | 25 Replies
2.3 years ago
bha
• 60
• updated 2.3 years ago
Kevin Blighe
43k
Remove duplicates in an extremely large text file
17 Votes | 20 Replies
12 months ago
OAJn8634
• 50
• updated 12 months ago
Santosh Anand
4.8k
Predicting Phenotype From Snp Data. Help!
26 Votes | 18 Replies
9.6 years ago
Selflessgene
• 50
• updated 9.6 years ago
Bi Yong
• 0
Has Anyone Got Plink Working With Gnu Parallel?
25 Votes | 16 Replies
8.4 years ago
jvijai
♦ 1.1k
• updated 8.4 years ago
tange
• 170
Weir And Cockerham Fst from PLINK(bed/bim/fam) input files
14 Votes | 16 Replies
5.7 years ago
kautilya
• 380
• updated 3.8 years ago
Myosotis1979
• 10
How To Analyze Imputed Gwas Data
59 Votes | 15 Replies
9.0 years ago
Stephen
2.7k
• updated 3.2 years ago
ShirleyDai
• 40
Beagle 4.1 error : Possible data conversion issue
8 Votes | 15 Replies
4.3 years ago
aritra90
• 40
• updated 2.1 years ago
scottf174
• 0
A problem with read ped file in plink?
7 Votes | 14 Replies
19 months ago
mary
• 200
• updated 19 months ago
zx8754
7.5k
How Does Ld In Plink Work?
21 Votes | 13 Replies
6.3 years ago
Javier2013
• 110
• updated 6.1 years ago
msutada
• 0
Plink: Quick Way To Combine Two Datasets Using Only Common Markers
22 Votes | 13 Replies
7.3 years ago
pufferfish
• 90
• updated 2.2 years ago
Leonida Monaco
• 20
Fastphase To Plink Format
6 Votes | 13 Replies
6.9 years ago
kumar.vinod81
• 280
recode SNPs ATGC illumina
0 Votes | 13 Replies
19 months ago
ami23.sarr
• 0
• updated 19 months ago
Kevin Blighe
43k
Reformat minimac imputated files to plink file
10 Votes | 13 Replies
5.8 years ago
Floris Brenk
• 890
• updated 3.5 years ago
ISB
• 0
plink linear regression
4 Votes | 12 Replies
2.1 years ago
AQ7
• 30
Read .txt file with Plink - Error
0 Votes | 12 Replies
23 months ago
BELA
• 0
Snptest (Gen/Sample) Files To R
11 Votes | 12 Replies
8.4 years ago
Joey
• 410
• updated 4.1 years ago
s.w.vanderlaan
• 40
Converting SNP from chr:pos to rs number using PLINK?
14 Votes | 11 Replies
4.1 years ago
dam4l
• 140
• updated 4.0 years ago
Biostar
20
Association Tests Using Impute2 Output
13 Votes | 11 Replies
6.5 years ago
Khader Shameer
18k
• updated 5.9 years ago
Kantale
• 110
Formatting Beadstudio Final Report Into Plink
5 Votes | 11 Replies
7.5 years ago
romsen
• 60
• updated 5.7 years ago
lhvkl
• 20
PLINK heterozygosity - Negative F statistic?
4 Votes | 11 Replies
23 months ago
Caragh
• 40
• updated 18 months ago
moldach
• 130
Flip Gwas Data To Positive Strand (Hg19 Build 37)
16 Votes | 11 Replies
6.0 years ago
Kevin
• 40
• updated 5.6 years ago
Endre Bakken Stovner
• 60
Minor Allele Frequency Filtration
2 Votes | 11 Replies
4.9 years ago
basalganglia
• 30
• updated 4.9 years ago
chrchang523
5.2k
Interpreting plink snp tagging output
8 Votes | 10 Replies
11 months ago
RNAseqer
• 110
• updated 11 months ago
chrchang523
5.2k
Plink filtering with physical position using a text file
5 Votes | 10 Replies
2.3 years ago
Sheila
• 300
• updated 22 months ago
amcheroo
• 0
Plotting Linkage Disequilibrium Decay Across The Genome
4 Votes | 10 Replies
6.3 years ago
Javier2013
• 110
• updated 2.1 years ago
hfang4
• 0
Make A Special File By Plink
3 Votes | 10 Replies
6.4 years ago
mary
• 200
• updated 6.4 years ago
zx8754
7.5k
.lgen to .ped conversion failing
3 Votes | 9 Replies
5.3 years ago
dharl
• 70
• updated 4.3 years ago
marwa.cs91
• 20
Split plink files by a number of SNPs
2 Votes | 9 Replies
19 months ago
kakukeshi
• 50
• updated 19 months ago
WouterDeCoster
39k
How To Deal With Missing (Na) Data In Plink
2 Votes | 9 Replies
6.3 years ago
xiaoyanyan97
• 0
• updated 6.3 years ago
Istvan Albert
80k
What are the major differences between plink and plink2?
5 Votes | 8 Replies
2.0 years ago
MAPK
♦ 1.4k
• updated 18 months ago
chrchang523
5.2k
Genotype Frequencies Calculation
5 Votes | 8 Replies
6.6 years ago
Peixe
• 580
• updated 6.6 years ago
zx8754
7.5k
Recoding lgen into Ped using plink
0 Votes | 8 Replies
4.3 years ago
njbernstein
• 40
• updated 3.8 years ago
dr.akilalshawi
• 0
gender assignment sex-check in Plink
11 Votes | 8 Replies
3.8 years ago
avari
• 80
• updated 2.8 years ago
Ray
• 20
Phased Data In Plink
18 Votes | 8 Replies
8.8 years ago
Pierre
• 480
• updated 16 months ago
Shicheng Guo
♦ 7.5k
Plink Map And Ped To Merlin Map And Pre - File Conversion Issues
5 Votes | 8 Replies
7.2 years ago
Varun
• 30
• updated 4.9 years ago
Arija
• 0
Remove Some Snps In Plink
10 Votes | 8 Replies
7.3 years ago
mary
• 200
• updated 4.2 years ago
chenhr
• 0
PLINK: filter for indels
3 Votes | 7 Replies
9 months ago
bsmith030465
• 140
• updated 9 months ago
zx8754
7.5k
Calculating Genomic Inflation Factor
9 Votes | 7 Replies
7.9 years ago
Debs
• 20
• updated 3.1 years ago
GabrielMontenegro
• 520
Extract specific variants from binary plink files
4 Votes | 7 Replies
19 months ago
OAJn8634
• 50
• updated 19 months ago
kakukeshi
• 50
How To Revert Allele Data To Atgc With Plink After Recoding To 12 Format
9 Votes | 7 Replies
6.9 years ago
kumar.vinod81
• 280
• updated 6.9 years ago
Nandini
• 810
Edit Column sex in ped file
3 Votes | 7 Replies
3.2 years ago
mm
• 20
Retrieve a subset of SNPs in Plink
2 Votes | 7 Replies
4.9 years ago
Sally
• 10
• updated 4.9 years ago
alesssia
• 520
How to remove duplicate SNPs from plink ped,vcf?
2 Votes | 7 Replies
20 months ago
Tania
• 120
• updated 20 months ago
Kevin Blighe
43k
multisample BED files to PED conversion
2 Votes | 7 Replies
5.6 years ago
nilakshafreezon
• 110
• updated 5.6 years ago
chrchang523
5.2k
Install Plink In Cygwin
1 Vote | 7 Replies
8.7 years ago
Zhshqzyc
• 490
• updated 8.7 years ago
j.f.quinn
• 0
Fast Eqtl Analysis Tool
16 Votes | 7 Replies
8.4 years ago
Purpleone
• 90
• updated 5.2 years ago
lkmklsmn
• 880
Convert fastq to plink .bed
1 Vote | 7 Replies
2.3 years ago
genomics Newbie
• 20
• updated 2.3 years ago
WouterDeCoster
39k
Convert Plink's ped file into compound genotype format and 0/1/2 format
2 Votes | 6 Replies
3.9 years ago
PAn
• 20
• updated 2.6 years ago
grum.gebre
• 10
Quantitative trait analysis
3 Votes | 6 Replies
5.1 years ago
toyan.j.p
• 30
• updated 5.0 years ago
Biostar
20
GWAS analysis using PLINK
1 Vote | 6 Replies
5.2 years ago
ngsgene
• 350
• updated 5.2 years ago
chrchang523
5.2k
Read MAP and PED files in PLINK
1 Vote | 6 Replies
22 months ago
ft821525
• 0
• updated 22 months ago
Wietje
• 200
Remove snps with missing names
1 Vote | 6 Replies
22 months ago
bha
• 60
Recent Locations • All
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Recent Replies
Comment: Testing recipe link by Istvan Albert 80k
@genomax18713 change your handle to make it simpler
Comment: Testing recipe link by Istvan Albert 80k
let's see if the parenthesis at the end is fixed (https://www.biostars.org) or like this (see https://www.biostars.org)
Comment: Testing by ATpoint 17k
@ATpoint ping
Answer: How do play audio (playsound) in background of Python script? by genomax 68k
https://gist.github.com/afrendeiro/6732a46b949e864d6803
Comment: Testing by RamRS 21k
A `new_biostars` tag, @genomax18713? Seriously?
Answer: This is a test post by Jason 0
And this is a test [sample of hypothesis in dissertation][1]. [1]: https://essays-expert.com/dissertation-hypothesis-writing-services.h…
Comment: This is a test post by Natay Aberra 0
Test this post emails
Answer: This is another test post by Natay Aberra 0
@ialbert hello there testing.
Answer: This is another test post by Natay Aberra 0
@ialbert testing out emails again
Answer: This is another test post by Natay Aberra 0
@ialbert sending another message, testing the emailing out
Answer: This is another test post by Natay Aberra 0
@ialbert teest the mentioning
Comment: This is another test post by Natay Aberra 0
@natay autocomplete on comment edit @Biostar1
Answer: This is another test post by Natay Aberra 0
@Natay-Aberra , autocomplete on answers @Biostar1 autocomplete on edit
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