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Showing : kegg • reset
21
Votes
24
Replies
1.4k
Views
Forum: From DEGs of a non-model animals to statistically significantly enriched pathways
RNA-Seq KEGG GO pathway enrichment Forum
4.4 years ago
Farbod ♦ 3.3k • updated 4.4 years ago
Carlo Yague ♦ 4.5k
60
Votes
21
Replies
11k
Views
15 follow
Which Is The Best Software To Represent Biological Pathways In A Directed Graph (Network) ?
kegg pathway network
10.4 years ago
Blenderous • 180 • updated 6.3 years ago
ostrokach • 280
36
Votes
17
Replies
22k
Views
11 follow
Get All The Genes In A Pathway (E.G. Kegg)
kegg pathway gwas gene
9.6 years ago
Stephen 2.7k • updated 2.4 years ago
RamRS 21k
20
Votes
16
Replies
7.2k
Views
Unexpected outcome: Gene Enrichment using Fisher's Test
R KEGG Enrichment gene Fisher's Test
6.4 years ago
Adrian Pelin ♦ 2.3k • updated 6.4 years ago
aodaaodaslman2033 • 0
32
Votes
15
Replies
19k
Views
8 follow
Kegg Data Download
kegg pathway api
7.7 years ago
anika.menon22 • 190 • updated 4.5 years ago
Guangchuang Yu ♦ 2.2k
10
Votes
15
Replies
2.1k
Views
6 follow
Mapping Pathways To Genes
kegg pathway
6.8 years ago
juncheng • 180 • updated 6.8 years ago
Neilfws 48k
8
Votes
15
Replies
1.9k
Views
problem with KEGG pathway gene extraction
kegg
5.2 years ago
Abdullah • 100 • updated 5.2 years ago
Kamil ♦ 1.9k
60
Votes
14
Replies
20k
Views
13 follow
Any Tools To Identify Significantly Altered Pathways?
pathway kegg microarray
10.1 years ago
Dejian ♦ 1.3k • updated 4.1 years ago
bioinfo8 • 120
3
Votes
13
Replies
1.6k
Views
Inconsistency in Panther vs KOBAS2.0. Other recommendation for KEGG?
RNA-Seq GENE ONTOLOGY GO KEGG
4.7 years ago
CandiceChuDVM ♦ 1.9k
4
Votes
13
Replies
3.2k
Views
Finding a list of genes contained in a given pathway
MAPK/ERK PI3K/Akt JAK/STAT Pathway KEGG
6.4 years ago
erikfas • 20 • updated 6.4 years ago
Neilfws 48k
3
Votes
12
Replies
7.2k
Views
8 follow
How to perform KEGG enrichment analyses on a set of genes
rna-seq kegg enrichment pathway R
4.2 years ago
miyakokodama • 20 • updated 2.6 years ago
bigmawen • 310
12
Votes
12
Replies
4.6k
Views
How To Extract Go Terms From A Given Kegg Id
biomart kegg go
8.5 years ago
Rm 7.8k • updated 23 months ago
Shaurya Jauhari • 40
19
Votes
12
Replies
11k
Views
9 follow
Gene Pathway Association File For Kegg
kegg pathway
9.9 years ago
Sequencegeek • 740 • updated 7.3 years ago
Biostar 20
5
Votes
11
Replies
2.7k
Views
Retrieve Fasta Sequences From Kegg By Keyword
kegg fasta dna protein search
8.2 years ago
marcelolaia • 0 • updated 8.2 years ago
Neilfws 48k
15
Votes
11
Replies
6.2k
Views
Hypergeometric Test R/Bioconductor Result Categorization
r bioconductor kegg gene enrichment
10.2 years ago
Thaman ♦ 3.2k • updated 10.0 years ago
Brad Chapman 9.4k
41
Votes
11
Replies
2.5k
Views
8 follow
Kegg Paywalled, What Do People Use?
pathway kegg database
8.6 years ago
Iddo • 230 • updated 23 months ago
Charles Warden 6.8k
20
Votes
10
Replies
5.0k
Views
7 follow
How Many Human Pathways Exist In Kegg Database?
kegg pathway database
9.6 years ago
Woa ♦ 2.7k • updated 6.8 years ago
Haluk • 170
9
Votes
10
Replies
3.2k
Views
Can We Download An Image Of Kegg ?
kegg
9.6 years ago
Radhouane Aniba • 750 • updated 9.6 years ago
Chris Evelo 10.0k
3
Votes
10
Replies
3.8k
Views
6 follow
Pathway analysis for transcriptome profiles
RNA-Seq trinity kegg pathway
6.1 years ago
Whoknows • 740 • updated 6.0 years ago
andrew • 460
14
Votes
10
Replies
2.6k
Views
How to get list of GeneIDs using SNP ID list?
SNP gene dbsnp kegg pathway
6.2 years ago
goksoy66 • 50 • updated 6.2 years ago
Maxime Lamontagne ♦ 2.1k
20
Votes
10
Replies
9.2k
Views
How To Use The Kegg Xml Files?
kegg pathway
10.5 years ago
Panos ♦ 1.7k • updated 2.4 years ago
RamRS 21k
7
Votes
9
Replies
3.8k
Views
EC number assignment tools
Kegg metabolism EC number Bioinformatics genome
6.6 years ago
sammy.ich17 • 20 • updated 6.5 years ago
Sean R Johnson • 120
5
Votes
9
Replies
878
Views
Unable to map genes to KEGG pathway using pathview
clusterProfiler R Oryza sativa KEGG bioconductor
2.3 years ago
rice.researcher • 130 • updated 2.2 years ago
bigmawen • 310
12
Votes
9
Replies
8.4k
Views
How To Download Kegg Drug Database
kegg
8.6 years ago
AP • 60 • updated 8.6 years ago
Damian Kao 15k
23
Votes
9
Replies
10k
Views
How To Batch Grab All Ko (Kegg Ontology) Terms Associated With Each Kegg Pathway?
kegg pathway
7.4 years ago
JacobS • 890 • updated 4.4 years ago
Dchoy • 40
5
Votes
8
Replies
4.5k
Views
How To Map Kegg Data - Pathways As Nodes, Compounds As Edges.
kegg network
8.2 years ago
Haji • 50 • updated 7.7 years ago
balaji • 40
6
Votes
8
Replies
2.2k
Views
Inconsistent numbers when using Kegg pathway analysis via DAVID?
DAVID kegg
5.6 years ago
alnchalker • 20 • updated 4.4 years ago
EagleEye 6.4k
6
Votes
8
Replies
1.2k
Views
how to get ko definition by using KEGG API?
KEGG
3.2 years ago
fanglujing • 30 • updated 3.2 years ago
cpad0112 11k
9
Votes
8
Replies
2.2k
Views
How can I find the relation between pathways in KEGG?
KEGG R Pathway
6.1 years ago
sedaghat.nafiseh • 20 • updated 6.1 years ago
Pavel Senin ♦ 1.9k
5
Votes
8
Replies
2.4k
Views
Looking For An Easy To Use Tool To Analyse A Gene Set For Enrichment Of Immunological Function
function analysis kegg
3.9 years ago
confusedious • 420
10
Votes
8
Replies
2.1k
Views
6 follow
List of genes to list of pathways (no enrichment)
genes pathways python reactome kegg
6.5 years ago
R.Blues • 80 • updated 6.5 years ago
Newgene • 350
12
Votes
8
Replies
9.7k
Views
How To Do Pathway Mapping Using Kegg/Kaas?
kegg pathway
10.6 years ago
Panos ♦ 1.7k • updated 10.6 years ago
mgalactus • 720
5
Votes
8
Replies
3.4k
Views
Current sources for pathway data/gene sets
Gene set MsigDB Kegg Biocarta Pathway
6.5 years ago
Lou • 10 • updated 6.5 years ago
B. Arman Aksoy ♦ 1.2k
3
Votes
8
Replies
2.5k
Views
Gostats : Kegghypergparams Error
kegg bioconductor
9.7 years ago
Radhouane Aniba • 750 • updated 9.7 years ago
Laurent ♦ 1.6k
1
Vote
8
Replies
1.9k
Views
Mapping multiple expression data on KEGG genes and metabolites
KEGG
5.9 years ago
The • 100 • updated 3.0 years ago
raghavsehgal1995 • 0
5
Votes
7
Replies
3.1k
Views
Identify Target Genes Of A Pathway
kegg target
9.8 years ago
Rima • 0 • updated 9.8 years ago
Larry_Parnell 16k
10
Votes
7
Replies
3.0k
Views
How To See Which Proteins / Enzymes Are Present In A Pathway (Using Resources In Kegg)?
pathway kegg
10.6 years ago
Panos ♦ 1.7k • updated 10.6 years ago
Khader Shameer 18k
0
Votes
7
Replies
741
Views
KEGG mapping from de novo transcriptome annotation
kegg rnaseq annotation kobas
2.8 years ago
pablo61991 • 70
1
Vote
7
Replies
4.3k
Views
Parsing ./spoNA.xml file failed, please check the file!
kegg s. pombe
6.6 years ago
Parham ♦ 1.4k
13
Votes
7
Replies
4.8k
Views
Merging Kegg Pathways
kegg pathway genes
8.6 years ago
Sudeep ♦ 1.6k • updated 4.5 years ago
kandoigaurav • 120
11
Votes
7
Replies
10k
Views
Available pipelines for functional annotaiton (COG, KEGG, GO) of genomes
genome KEGG COG GO genome annotation
6.2 years ago
dago ♦ 2.5k • updated 6.2 years ago
hfang.shanghai • 140
3
Votes
7
Replies
2.6k
Views
Kegg Pathways In Text?
kegg r pathway text
8.9 years ago
Avoks • 140 • updated 8.9 years ago
Casey Bergman 18k
7
Votes
7
Replies
2.2k
Views
Is There A Pathway Database With Directed Gene-Gene Edges
pathway kegg
9.7 years ago
Lyco ♦ 2.3k • updated 5.1 years ago
Biostar 20
18
Votes
7
Replies
1.5k
Views
How To Ensure Long-Term Support For Crucial Resources? Or Should We?
kegg
9.7 years ago
Mary 11k • updated 9.7 years ago
Casey Bergman 18k
2
Votes
7
Replies
1.9k
Views
Retrieve 'Enzymes By Compound' Filtered By Organism
enzyme network api kegg
9.1 years ago
Lo Sauer • 160 • updated 9.1 years ago
Damian Kao 15k
9
Votes
7
Replies
2.3k
Views
Remove All Genes Associated With A Kegg Pathway From Analysis
gene kegg filter
10.5 years ago
Mike Dewar ♦ 1.5k • updated 10.5 years ago
Will 4.5k
1
Vote
7
Replies
1.4k
Views
map proteins to EC numbers (KEGG) in non-model fungal organisms
KEGG hmmer
5.1 years ago
bioPiraten • 10 • updated 5.1 years ago
Manuel Landesfeind ♦ 1.2k
8
Votes
6
Replies
3.3k
Views
How To Get Flybase Gene Id According To Kegg Gene Id?
kegg identifiers
9.9 years ago
Dejian ♦ 1.3k • updated 9.9 years ago
Lars Juhl Jensen 11k
19
Votes
6
Replies
5.5k
Views
Is There Any Way To Retrieve Genes' Sequences In Fasta Format Using The Kegg Orthology Code?
sequence retrieval database kegg fasta
10.2 years ago
Luke • 230 • updated 10.2 years ago
Skwsm • 40
3
Votes
6
Replies
1.4k
Views
Can we draw phylogenetic tree using a set of Kegg Orthology Terms ?
KO Phylogeny KEGG
5.1 years ago
Amk • 120 • updated 5.1 years ago
jhc ♦ 2.8k
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