Question: Defining bivalent promoters with H3K4me3 and H3K27me3 ChIPseq data
5 weeks ago
sikhtechai • 30

Dear all,

Imagine, you have H3K4me3 and H3K27me3 ChIPseq data. How would you befine bivalent promoters? Like, could you please explain possible workflow? Like, for example, after peak calling, would you use bedtools to intersect and find the overlapping regions with both those marks? Or something else? I will really appreciate any kind of suggestions! Thank you in advance!

ChIP-Seq • 33 views
ADD COMMENTlink 5 weeks ago sikhtechai • 30

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