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5.1 years ago
l.souza
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80
I would like to map the identified proteins obtained by a LC-MS/MS experiment to an existing genome sequence deposited at PATRIC database. I have a list with the proteins accession (Uniprot).
Does anyone have a suggestion on how to do it?
Best regards,
Lucas
0
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- create a database of proteins (using blast, diamond, rapsearch2 etc)
- Search contigs/nucleotide sequences against database of proteins.
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5.1 years ago by
cpad0112
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