Question: Mitochondrial genomic analysis by PCoA, PCA and Arlequin
Entering edit mode
11 months ago
micro32uvas • 10

Hello everyone,

I have been working on the mitochondrial genome but it is not my expert field.

I have extracted complete mitochondria from my whole genome sequenced samples. So far, I have used MEGA, DNASP and other related software. But I want to use Arlequin for population analysis but cannot figure out the proper pipeline. I have fasta format as well as fastq. Can anyone help me with the basics, please Also, I want to perform PCA and PCoA for different families in my dataset. I might know a few of these things but cannot figure out the ways and interpretations at the moment.

Your kind suggestions are way valuable.

Thanks, Ainnie

Login before adding your answer.

Powered by the version 1.5