available subcutaneous adipose RNA-seq
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6.3 years ago
ATCG ▴ 380

I'm looking for any publicly available subcutaneous adipose RNA-seq data sets containing at least 100 individuals. Thank you!

RNA-Seq Subcutaneous adipose • 1.3k views
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You could be looking for a long while if you have a specific requirement for that large a sample and/or human data. Here is all that an ENA search brings up and it includes other organisms.

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6.3 years ago

The GTEx consortium have you covered - according to this there are 442 samples in relase 7

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Interesting. Do you know how you can download entire datasets for each of these samples? I can't even see the individual sample ID's.

Edit: Samples are not publicly available. One needs to get approval for access to the original data via dbGaP. These are post-mortem samples.

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You can download the quantifications for the individual samples here.

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I am excluding GTEx actually. Thanks

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