updated 1 hour ago by
Pierre Lindenbaum
161k
•
written 1 hour ago by
lorena9132
•
0
1
vote
1
reply
26
views
0
votes
0
replies
16
views
0
votes
0
replies
19
views
2
votes
2
replies
141
views
updated 2 hours ago by
geneontologyhelp
▴
360
•
written 1 day ago by
catherine.teyssier
•
0
0
votes
1
reply
111
views
updated 3 hours ago by
Istvan Albert
100k
•
written 1 day ago by
Abeer
•
0
795
votes
167
replies
141k
views
109 follow
updated 3 months ago by
Biostar
2.7k
•
written 7.4 years ago by
Istvan Albert
100k
0
votes
4
replies
176
views
0
votes
0
replies
28
views
0
votes
1
reply
60
views
updated 2 hours ago by
GenoMax
141k
•
written 4 hours ago by
v.berriosfarias
▴
140
0
votes
1
reply
114
views
1
vote
1
reply
75
views
updated 4 hours ago by
Pierre Lindenbaum
161k
•
written 5 hours ago by
Biostar
2.7k
1
vote
1
reply
74
views
updated 5 hours ago by
GenoMax
141k
•
written 5 hours ago by
heelpPlease
•
0
2
votes
9
replies
694
views
0
votes
9
replies
220
views
0
votes
1
reply
80
views
updated 6 hours ago by
bk11
★
2.3k
•
written 6 hours ago by
alphaflylizard
•
0
3
votes
3
replies
134
views
0
votes
3
replies
156
views
updated 3 hours ago by
Istvan Albert
100k
•
written 8 hours ago by
Dylan
•
0
0
votes
1
reply
67
views
updated 7 hours ago by
Pierre Lindenbaum
161k
•
written 8 hours ago by
Lada
▴
30
4
votes
11
replies
373
views
3
votes
7
replies
406
views
0
votes
0
replies
45
views
9 hours ago by
ohtang7
▴
40
2
votes
0
replies
62
views
updated 10 hours ago by
Ram
43k
•
written 10 hours ago by
carlopecoraro2
★
2.5k
2
votes
2
replies
362
views
updated 11 hours ago by
Pierre Lindenbaum
161k
•
written 8 months ago by
AshleeThomson
▴
80
0
votes
1
reply
88
views
8
votes
5
replies
4.7k
views
0
votes
4
replies
177
views
5
votes
3
replies
530
views
updated 13 hours ago by
colindaven
6.4k
•
written 5 days ago by
kirillkirilenko
▴
40
0
votes
0
replies
51
views
0
votes
3
replies
320
views
0
votes
0
replies
58
views
1
vote
3
replies
156
views
0
votes
3
replies
156
views
1
vote
1
reply
118
views
updated 15 hours ago by
Michael
54k
•
written 16 hours ago by
michael.flower.14
▴
180
0
votes
2
replies
129
views
0
votes
1
reply
91
views
updated 10 hours ago by
bk11
★
2.3k
•
written 16 hours ago by
Susmita Mandal
▴
110
0
votes
1
reply
92
views
updated 13 hours ago by
GenoMax
141k
•
written 17 hours ago by
sarahawan92
▴
10
0
votes
3
replies
451
views
updated 17 hours ago by
atharvakarkare14
▴
10
•
written 5 days ago by
Ashok
•
0
1
vote
1
reply
123
views
0
votes
2
replies
148
views
updated 3 hours ago by
Istvan Albert
100k
•
written 19 hours ago by
qudrat.nii
▴
10
0
votes
0
replies
90
views
Forum:
Improvement on automatic annotation of single-cell RNA-seq data from the literature using LLM
20 hours ago by
yxwucq
•
0
0
votes
0
replies
58
views
0
votes
6
replies
254
views
0
votes
2
replies
145
views
1 day ago by
sainavyav22
•
0
0
votes
1
reply
113
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
Cameron.walker9900
•
0
0
votes
8
replies
249
views
2
votes
6
replies
223
views
0
votes
0
replies
88
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
maxime.policarpo
▴
200
3
votes
3
replies
155
views
0
votes
0
replies
75
views
0
votes
0
replies
81
views
Recent Votes
Recent Locations •
All
United States, 1 minute ago
United States, 1 minute ago
United States, 2 minutes ago
United States, 3 minutes ago
Australia, 4 minutes ago
Machhagan, 8 minutes ago
United States, 9 minutes ago
Recent Awards •
All
Popular Question to
v.berriosfarias
▴
140
Popular Question to
AdviceSeeker
•
0
Great Question to
Ann
★
2.4k
Scholar to
marco.barr
▴
80
Popular Question to
Kash
▴
110
Recent Replies
Comment: TCGA2STAT Error: Firehose connection
by
LauferVA
4.2k
agree.
from a data-centric (rather than software centric) standpoint, it shouldn't be hard to get the TCGA data you are looking for from o…
Comment: Redirection of Duplicate PMIDs
by
LauferVA
4.2k
yep. in this case id definitely start with the grant numbers themselves as others have indicated. i did not recommend this before due to un…
Comment: GTF file for Rhinolophus sinicus
by
atowns21
•
0
This download doesn't seem to work for me. There is a message on the website saying "Warning: contaminated. Status: RefSeq GCF_001888835.1 …
Answer: HaplotypeCaller - only SNPs
by
Pierre Lindenbaum
161k
Filter the vcf dowstream after haplotypecaller using bcftools or gatk variantfiltration
Answer: Gene set enrichment analysis differences between 2020 and 2024
by
geneontologyhelp
▴
360
We have releases about monthly in order to keep our data accurate and reflect current understanding. In 4 years, there have been about 40 r…
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
GenoMax
141k
Let us know when you find out. Would be a useful thing to know what the data looks like.
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
atowns21
•
0
Yes, that is a very good idea. Thanks for the help!
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
GenoMax
141k
Only thing would be to try them out. See if you can detect them in the data you have.
You could also simply look for unique representativ…
Comment: How to calculate identity percentage between proteins contained in a FASTA file?
by
GenoMax
141k
`clustal omega` can calculate distance matrix between two proteins (makes sense if your proteins are of similar size). You could try that: …
Comment: Should I use unpaired reads from trimmomatic
by
swbarnes2
14k
If the unpaired are _2, files, the _1 must exist somewhere. But the simple answer is probably going to be to just use all the _2 only. Yo…
Comment: Is it Acceptable to Have Uniform Quality Scores in a FASTQ File?
by
GenoMax
141k
> The needless granularity (fake precision) was obvious from the start
You are assuming that all data generated is always of great quality…
Answer: Blasting two protein sequences vs two nucleotide sequences
by
Istvan Albert
100k
There are various versions of blast, that search in translated spaces, see blastx and tblastn
https://blast.ncbi.nlm.nih.gov/Blast.cgi
…
Answer: Should I use unpaired reads from trimmomatic
by
Istvan Albert
100k
If you have lots of data, both paired and unpaired, then the best strategy is probably to treat them separately and merge the counts at the…
Comment: Difference between samtools "-f 9" and "-f 11"
by
Istvan Albert
100k
It is very easy to make nonsensical flags (unfortunately a flaw of the SAM spec itself) ... not to mention the awkward constructs: a primar…
Comment: Heatmap and rna-seq
by
Istvan Albert
100k
This forum is dedicated to asking their question on bioinformatics. As long as the topic is bioinformatics, all questions are welcome, and …
Traffic: 1925 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6