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Comment: Comment: Decision of Random Effect and Random Slope in rare cases
10 weeks ago by manjumoorthy95 ▴ 60
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2
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331
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Decision of Random Effect and Random Slope in rare cases
LMM Model
10 weeks ago by manjumoorthy95 ▴ 60
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2
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2.0k
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Comment: Comment: TCGA Sample barcode
2.8 years ago by manjumoorthy95 ▴ 60
2
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4
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2.0k
views
TCGA Sample barcode
Tumor Barcode Normal TCGA
updated 2.8 years ago by 6.0k • written 2.8 years ago by ▴ 60
6
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5
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1.2k
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paired end data with varying read length
RNA-Seq illumina insert size
updated 3.1 years ago by • 0 • written 4.6 years ago by ▴ 60
3
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3
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3.3k
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Color key in heatmap.2 function in R
R
updated 3.3 years ago by 20 • written 3.9 years ago by ▴ 60
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1
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3.3k
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Comment: C: Color key in heatmap.2 function in R
updated 3.9 years ago by 43k • written 3.9 years ago by ▴ 60
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0
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778
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dispersionPlot in cummeRbund package
rna-seq cummeRbund dispersionPlot dispersion
4.6 years ago by manjumoorthy95 ▴ 60
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0
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4.1k
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Comment: C: How to interpret reference homozygous genotype in the VCF file generated by GATK
updated 4.9 years ago by 43k • written 5.0 years ago by ▴ 60
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2
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1.2k
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genotype field in vcf file
SNP vcf genotype NGS
updated 4.9 years ago by 20 • written 5.0 years ago by ▴ 60
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0
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1.4k
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Comment: C: Phylogenomic tree construction
4.9 years ago by manjumoorthy95 ▴ 60
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0
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1.4k
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Comment: C: Phylogenomic tree construction
4.9 years ago by manjumoorthy95 ▴ 60
2
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6
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1.4k
views
Phylogenomic tree construction
phylogenomics
updated 4.9 years ago by ★ 1.8k • written 4.9 years ago by ▴ 60
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1
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1.4k
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Comment: C: Phylogenomic tree construction
4.9 years ago by manjumoorthy95 ▴ 60
0
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0
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1.1k
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Fishers test for cog analysis
p value fishers test cog
5.0 years ago by manjumoorthy95 ▴ 60
0
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0
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1.4k
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Comment: C: heterozygous genotype in bacterial snp calling
5.0 years ago by manjumoorthy95 ▴ 60
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2
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1.4k
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heterozygous genotype in bacterial snp calling
snp haploid
updated 5.0 years ago by 14k • written 5.0 years ago by ▴ 60
0
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1
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3.1k
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Comment: C: Heatmap.2 dendrogram generation
5.0 years ago by manjumoorthy95 ▴ 60
1
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4
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3.1k
views
Heatmap.2 dendrogram generation
heatmap.2 R hclust
updated 5.0 years ago by 43k • written 5.0 years ago by ▴ 60
0
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0
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4.9k
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Comment: C: PCA analysis with R
5.0 years ago by manjumoorthy95 ▴ 60
0
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1
reply
4.9k
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Comment: C: PCA analysis with R
5.0 years ago by manjumoorthy95 ▴ 60
7
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11
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4.9k
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PCA analysis with R
R PCA ggfortify autoplot
updated 5.0 years ago by 87k • written 5.0 years ago by ▴ 60
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1
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4.9k
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Comment: C: PCA analysis with R
5.0 years ago by manjumoorthy95 ▴ 60
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0
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4.9k
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Comment: C: PCA analysis with R
5.0 years ago by manjumoorthy95 ▴ 60
0
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0
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3.3k
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Comment: C: Genotype phased and unphased
5.0 years ago by manjumoorthy95 ▴ 60
0
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1
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3.3k
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Comment: C: Genotype phased and unphased
5.0 years ago by manjumoorthy95 ▴ 60
0
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2
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3.3k
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Comment: C: Genotype phased and unphased
5.0 years ago by manjumoorthy95 ▴ 60
0
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0
replies
871
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Snpeff for predicting snp effect
SNP snpeff
5.0 years ago by manjumoorthy95 ▴ 60
0
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0
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3.3k
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Comment: C: Genotype phased and unphased
5.0 years ago by manjumoorthy95 ▴ 60
0
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1
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3.3k
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Comment: C: Genotype phased and unphased
5.0 years ago by manjumoorthy95 ▴ 60
2
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9
replies
3.3k
views
Genotype phased and unphased
genotype phasing vcf SNP
updated 5.0 years ago by 161k • written 5.0 years ago by ▴ 60
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2
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4.5k
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Comment: C: How to give merged reads as input in spades
5.2 years ago by manjumoorthy95 ▴ 60
5
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8
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4.5k
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How to give merged reads as input in spades
assembly spades merged de novo
updated 5.3 years ago by ★ 3.0k • written 5.3 years ago by ▴ 60
0
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0
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4.5k
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Comment: C: How to give merged reads as input in spades
5.3 years ago by manjumoorthy95 ▴ 60
0
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0
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4.5k
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Comment: C: How to give merged reads as input in spades
5.3 years ago by manjumoorthy95 ▴ 60
0
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0
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1.3k
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Comment: C: interpreting local blast output
5.3 years ago by manjumoorthy95 ▴ 60
2
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2
replies
1.3k
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interpreting local blast output
localBlast alignment denovo
updated 5.3 years ago by 21k • written 5.3 years ago by ▴ 60
0
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0
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3.4k
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Comment: C: Reads not getting mapped to reference genome
5.3 years ago by manjumoorthy95 ▴ 60
0
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0
replies
1.8k
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Comment: C: Extracting contaminated reads from the sequenced data
5.3 years ago by manjumoorthy95 ▴ 60
0
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0
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1.8k
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Comment: C: Extracting contaminated reads from the sequenced data
5.3 years ago by manjumoorthy95 ▴ 60
0
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0
replies
3.4k
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Comment: C: Reads not getting mapped to reference genome
5.3 years ago by manjumoorthy95 ▴ 60
0
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6
replies
3.4k
views
Reads not getting mapped to reference genome
mapping Bowtie de novo assembly whole genome
5.3 years ago by manjumoorthy95 ▴ 60
0
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1
reply
3.4k
views
Comment: C: Reads not getting mapped to reference genome
5.3 years ago by manjumoorthy95 ▴ 60
5
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7
replies
1.8k
views
Extracting contaminated reads from the sequenced data
genome sequencing extraction illumina
updated 5.3 years ago by 141k • written 5.3 years ago by ▴ 60
0
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0
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1.8k
views
Comment: C: Extracting contaminated reads from the sequenced data
5.3 years ago by manjumoorthy95 ▴ 60
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